myRT

myRT report for GCA_002861165.1_ASM286116v1

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Seq: PKHD01000008.1 Gardnerella vaginalis strain UMB0061 .16933_8_2.8, whole genome shotgun sequence (18831 bp)
Overview 1 RT 1: 540-5244 bp Neighborhood of RT #1 [540, 5303] ParE_toxin COG2865 RVT-UG15 COG1373 Nudix_Hydrolase_29 Feature: gene Location: 540-863 bp Feature: domain Description: ParE_toxin Location: 558-837 bp Feature: domain Description: ParE_toxin Location: 558-837 bp Feature: gene Location: 1330-2745 bp Feature: domain Description: COG2865 Location: 1333-2740 bp Feature: domain Description: COG2865 Location: 1 333-2740 bp Feature: gene Location: 2779-4284 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3208-3607 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 3208-3607 bp Feature: gene Location: 4560-4814 bp Feature: domain Description: COG1373 Location: 4590-4806 bp Feature: domain Description: COG1 373 Location: 4590-4806 bp Feature: gene Location: 4818-5303 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 4863-5244 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 4863-5244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG15, COG1373 (Predicted ATPase, AAA+ superfamily ), Nudix_Hydrolase_29 (cd04688)