myRT

myRT report for GCA_002862045.1_ASM286204v1

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Seq: PKJM01000001.1 Gardnerella vaginalis strain UMB0233 .16933_8_5.1, whole genome shotgun sequence (611978 bp)
Overview 1 RT 1: 12121-16855 bp Neighborhood of RT #1 [12121, 16881] Nudix_Hydrolase_29 COG1373 RVT-UG15 COG2865 ParE_toxin Feature: gene Location: 12121-12606 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 12166-12547 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 1 21 66-1 2547 bp Feature: gene Location: 12610-12864 bp Feature: domain Description: COG1373 Location: 12640-12856 bp Feature: domain Description: COG1 373 Location: 1 2640-1 2856 bp Feature: gene Location: 13137-14642 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 13566-13965 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 3566-1 3965 bp Feature: gene Location: 14676-16091 bp Feature: domain Description: COG2865 Location: 14679-16086 bp Feature: domain Description: COG2865 Location: 1 4679-1 6086 bp Feature: gene Location: 16558-16881 bp Feature: domain Description: ParE_toxin Location: 16576-16855 bp Feature: domain Description: ParE_toxin Location: 1 6576-1 6855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_29 (cd04688), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG15, COG2865 (Predicted transcriptional regulator, contains HTH domain ), ParE_toxin (pfam05016)