myRT

myRT report for GCA_002862605.1_ASM286260v1

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Seq: PKDM01000490.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000003439, whole genome shotgun sequence (10183 bp)
Overview 1 RT 1: 323-9311 bp Neighborhood of RT #1 [323, 9316] RTPR Hint LAGLIDADG_3 LAGLIDADG_3 RTPR Hint LAGLIDADG_3 Hint Hint Hop RTPR Hint RTPR RVT_N RVT-GII GIIM HNH RTPR Feature: gene Location: 323-475 bp Feature: gene Location: 877-6549 bp Feature: domain Description: RTPR Location: 880-1357 bp Feature: domain Description: RTPR Location: 880-1 357 bp Feature: domain Description: Hint Location: 1357-1630 bp Feature: domain Description: Hint Location: 1 357-1 630 bp Feature: domain Description: LAGLIDADG_3 Location: 1729-1954 bp Feature: domain Description: LAGLIDADG_3 Location: 1 729-1 954 bp Feature: domain Description: LAGLIDADG_3 Location: 2020-2209 bp Feature: domain Description: LAGLIDADG_3 Location: 2020-2209 bp Feature: domain Description: RTPR Location: 2491-2935 bp Feature: domain Description: RTPR Location: 2491 -2935 bp Feature: domain Description: Hint Location: 2941-3238 bp Feature: domain Description: Hint Location: 2941 -3238 bp Feature: domain Description: LAGLIDADG_3 Location: 3568-3841 bp Feature: domain Description: LAGLIDADG_3 Location: 3568-3841 bp Feature: domain Description: Hint Location: 3856-4030 bp Feature: domain Description: Hint Location: 3856-4030 bp Feature: domain Description: Hint Location: 4063-4312 bp Feature: domain Description: Hint Location: 4063-431 2 bp Feature: domain Description: Hop Location: 4639-4765 bp Feature: domain Description: Hop Location: 4639-4765 bp Feature: domain Description: RTPR Location: 5029-5758 bp Feature: domain Description: RTPR Location: 5029-5758 bp Feature: domain Description: Hint Location: 5758-6067 bp Feature: domain Description: Hint Location: 5758-6067 bp Feature: domain Description: RTPR Location: 6220-6463 bp Feature: domain Description: RTPR Location: 6220-6463 bp Feature: gene Location: 6724-8445 bp Feature: domain Description: RVT_N Location: 6766-7012 bp Feature: domain Description: RVT_N Location: 6766-701 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7057-7726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7057-7726 bp Feature: domain Description: GIIM Note: maturase Location: 7828-8062 bp Feature: domain Description: GIIM Note: maturase Location: 7828-8062 bp Feature: domain Description: HNH Note: nucleases Location: 8284-8422 bp Feature: domain Description: HNH Note: nucleases Location: 8284-8422 bp Feature: gene Location: 8618-8830 bp Feature: gene Location: 9053-9316 bp Feature: domain Description: RTPR Location: 9095-9311 bp Feature: domain Description: RTPR Location: 9095-931 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RTPR (TIGR02505), Hint (pfam01079), LAGLIDADG_3 (pfam14528), Hop (COG1372), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: PKDM01000931.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000005130, whole genome shotgun sequence (7932 bp)
Overview 1 RT 1: 791-6920 bp Neighborhood of RT #1 [791, 7060] RVT_N McrA RVT_N RVT-GII HNH dnaG RVT_N RVT-GII HNH dnaG Feature: gene Location: 791-1051 bp Feature: domain Description: RVT_N Location: 908-1022 bp Feature: domain Description: RVT_N Location: 908-102 2 bp Feature: gene Location: 1066-1371 bp Feature: domain Description: McrA Location: 1078-1351 bp Feature: domain Description: McrA Location: 1078-1351 bp Feature: gene Location: 2151-2798 bp Feature: domain Description: RVT_N Location: 2268-2508 bp Feature: domain Description: RVT_N Location: 2 2 68-2 508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562-2781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 562 -2 781 bp Feature: gene Location: 2849-3076 bp Feature: domain Description: HNH Note: nucleases Location: 2915-3050 bp Feature: domain Description: HNH Note: nucleases Location: 2 915-3050 bp Feature: gene Location: 3241-3600 bp Feature: domain Description: dnaG Location: 3244-3583 bp Feature: domain Description: dnaG Location: 32 44-3583 bp Feature: gene Location: 3787-3951 bp Feature: gene Location: 4179-4457 bp Feature: domain Description: RVT_N Location: 4296-4455 bp Feature: domain Description: RVT_N Location: 42 96-4455 bp Feature: gene Location: 4485-5525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587-4941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587-4941 bp Feature: domain Description: HNH Note: nucleases Location: 5223-5349 bp Feature: domain Description: HNH Note: nucleases Location: 52 2 3-5349 bp Feature: gene Location: 5591-7060 bp Feature: domain Description: dnaG Location: 5594-6920 bp Feature: domain Description: dnaG Location: 5594-692 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), McrA (COG4058), RVT-GII, HNH (pfam01844), dnaG (TIGR01391)

Seq: PKDM01000893.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000005910, whole genome shotgun sequence (7256 bp)
Overview 1 RT 1: 1-3974 bp Neighborhood of RT #1 [1, 3994] RVT_N RVT-GII GIIM PRK07773 Hop ThyX Feature: gene Location: 1-153 bp Feature: gene Location: 1383-1604 bp Feature: domain Description: RVT_N Location: 1500-1599 bp Feature: domain Description: RVT_N Location: 1500-1599 bp Feature: gene Location: 1831-2028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834-1993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 4-1993 bp Feature: gene Location: 2001-2207 bp Feature: domain Description: GIIM Note: maturase Location: 2010-2091 bp Feature: domain Description: GIIM Note: maturase Location: 2010-2091 bp Feature: gene Location: 2651-3994 bp Feature: domain Description: PRK07773 Location: 2849-3116 bp Feature: domain Description: PRK07773 Location: 2849-3 116 bp Feature: domain Description: Hop Location: 3266-3545 bp Feature: domain Description: Hop Location: 3 266-3 545 bp Feature: domain Description: ThyX Location: 3548-3974 bp Feature: domain Description: ThyX Location: 3 548-3 974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK07773 (replicative DNA helicase; Validated), Hop (COG1372), ThyX (COG1351)

Seq: PKDM01000515.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000006003, whole genome shotgun sequence (7192 bp)
Overview 1 RT 1: 51-4215 bp Neighborhood of RT #1 [51, 4215] RVT_N RVT-GII RVT_N Feature: gene Location: 51-437 bp Feature: gene Location: 1025-1765 bp Feature: domain Description: RVT_N Location: 1148-1385 bp Feature: domain Description: RVT_N Location: 114 8-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 33-1697 bp Feature: gene Location: 2700-3104 bp Feature: domain Description: RVT_N Location: 2817-3045 bp Feature: domain Description: RVT_N Location: 2817-304 5 bp Feature: gene Location: 4000-4215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: PKDM01000629.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000006121, whole genome shotgun sequence (7113 bp)
Overview 1 RT 1: 1308-5325 bp Neighborhood of RT #1 [1308, 5325] lyz_endolysin_autolysin RVT_N RVT-GII RVT-GII YkfC COG4346 Feature: gene Location: 1308-1574 bp Feature: gene Location: 1661-1816 bp Feature: domain Description: lyz_endolysin_autolysin Location: 1667-1799 bp Feature: domain Description: lyz_endolysin_autolysin Location: 1667-1799 bp Feature: gene Location: 2238-3899 bp Feature: domain Description: RVT_N Location: 2355-2601 bp Feature: domain Description: RVT_N Location: 235 5 -2601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2646-2994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2646-2994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3060-3399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3060-3399 bp Feature: domain Description: YkfC Location: 3552-3732 bp Feature: domain Description: YkfC Location: 35 5 2-3732 bp Feature: gene Location: 4126-4404 bp Feature: domain Description: COG4346 Location: 4138-4324 bp Feature: domain Description: COG4346 Location: 4138-4324 bp Feature: gene Location: 5113-5325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lyz_endolysin_autolysin (cd00737), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), COG4346 (Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase )

Seq: PKDM01000034.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000006715, whole genome shotgun sequence (6712 bp)
Overview 1 RT 1: 58-6592 bp Neighborhood of RT #1 [58, 6594] RVT_N RVT-GII KOG4768 RVT_N RVT_N RVT-GII GIIM YhhI Feature: gene Location: 58-345 bp Feature: gene Location: 766-1026 bp Feature: gene Location: 1796-3586 bp Feature: domain Description: RVT_N Location: 1850-2096 bp Feature: domain Description: RVT_N Location: 1850-2096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2144-2825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2144-2825 bp Feature: domain Description: KOG4768 Location: 2933-3044 bp Feature: domain Description: KOG476 8 Location: 2933-3044 bp Feature: gene Location: 4230-5792 bp Feature: domain Description: RVT_N Location: 4281-4434 bp Feature: domain Description: RVT_N Location: 4281-4434 bp Feature: domain Description: RVT_N Location: 4575-4668 bp Feature: domain Description: RVT_N Location: 4575-46 6 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4701-5301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4701-5301 bp Feature: domain Description: GIIM Note: maturase Location: 5379-5613 bp Feature: domain Description: GIIM Note: maturase Location: 5379-56 13 bp Feature: gene Location: 6183-6344 bp Feature: gene Location: 6385-6594 bp Feature: domain Description: YhhI Location: 6490-6592 bp Feature: domain Description: YhhI Location: 6 490-6 592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), GIIM (pfam08388), YhhI (COG5433)

Seq: PKDM01000058.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000007462, whole genome shotgun sequence (6274 bp)
Overview 1 RT 1: 2275-5780 bp Neighborhood of RT #1 [2275, 5824] HNH lyz_endolysin_autolysin RVT_N RVT-GII GIIM McrA Feature: gene Location: 2275-2484 bp Feature: domain Description: HNH Note: nucleases Location: 2293-2386 bp Feature: domain Description: HNH Note: nucleases Location: 2293-2386 bp Feature: gene Location: 2695-3426 bp Feature: domain Description: lyz_endolysin_autolysin Location: 2698-2917 bp Feature: domain Description: lyz_endolysin_autolysin Location: 2698-2917 bp Feature: gene Location: 4016-5824 bp Feature: domain Description: RVT_N Location: 4133-4376 bp Feature: domain Description: RVT_N Location: 4133-437 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4424-5117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4424-5117 bp Feature: domain Description: GIIM Note: maturase Location: 5189-5423 bp Feature: domain Description: GIIM Note: maturase Location: 5189-5423 bp Feature: domain Description: McrA Location: 5498-5780 bp Feature: domain Description: McrA Location: 5498-57 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), lyz_endolysin_autolysin (cd00737), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: PKDM01000584.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000008315, whole genome shotgun sequence (5909 bp)
Overview 1 RT 1: 1512-4932 bp Neighborhood of RT #1 [1512, 4932] RVT_N RVT-GII Feature: gene Location: 1512-1790 bp Feature: gene Location: 2015-2293 bp Feature: domain Description: RVT_N Location: 2138-2291 bp Feature: domain Description: RVT_N Location: 2138 -2291 bp Feature: gene Location: 2466-2732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2469-2697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2469-2697 bp Feature: gene Location: 2994-3176 bp Feature: gene Location: 3352-4932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: PKDM01000468.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000008745, whole genome shotgun sequence (5720 bp)
Overview 1 RT 1: 1623-5706 bp Neighborhood of RT #1 [1623, 5717] XisH TIGR03985 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1623-1853 bp Feature: domain Description: XisH Location: 1629-1824 bp Feature: domain Description: XisH Location: 1629 -1824 bp Feature: gene Location: 2191-3657 bp Feature: domain Description: TIGR03985 Location: 2893-3652 bp Feature: domain Description: TIGR039 85 Location: 289 3-3652 bp Feature: gene Location: 3721-4050 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3727-4048 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3727-4048 bp Feature: gene Location: 4309-5328 bp Feature: domain Description: Cas1_I-II-III Location: 4318-5293 bp Feature: domain Description: Cas1_I-II-III Location: 4318-529 3 bp Feature: gene Location: 5469-5717 bp Feature: domain Description: Cas2_I_II_III Location: 5475-5706 bp Feature: domain Description: Cas2_I_II_III Location: 5475-5706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisH (pfam08814), TIGR03985 (CRISPR-associated protein, TIGR03985 family), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: PKDM01000718.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000009440, whole genome shotgun sequence (5446 bp)
Overview 1 RT 1: 1295-4417 bp Neighborhood of RT #1 [1295, 4417] dam RVT_N RVT-GII GIIM Feature: gene Location: 1295-2002 bp Feature: domain Description: dam Location: 1307-1991 bp Feature: domain Description: dam Location: 1307-1991 bp Feature: gene Location: 2431-3930 bp Feature: domain Description: RVT_N Location: 2473-2719 bp Feature: domain Description: RVT_N Location: 2473-2719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761-3460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761-3460 bp Feature: domain Description: GIIM Note: maturase Location: 3559-3793 bp Feature: domain Description: GIIM Note: maturase Location: 3559-3793 bp Feature: gene Location: 4133-4417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PKDM01000253.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000016393, whole genome shotgun sequence (3915 bp)
Overview 1 RT 1: 814-3808 bp Neighborhood of RT #1 [814, 3912] PLN00203 RVT-GII Feature: gene Location: 814-2109 bp Feature: domain Description: PLN00203 Location: 820-2086 bp Feature: domain Description: PLN00203 Location: 820-2086 bp Feature: gene Location: 3228-3392 bp Feature: gene Location: 3649-3912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3655-3808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3655-3808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN00203 (glutamyl-tRNA reductase), RVT-GII

Seq: PKDM01000586.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000022705, whole genome shotgun sequence (3240 bp)
Overview 1 RT 1: 2-2183 bp Neighborhood of RT #1 [2, 2197] RVT-GII GIIM McrA PRK10717 TRX_Fd_family Feature: gene Location: 2-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-347 bp Feature: domain Description: GIIM Note: maturase Location: 422-656 bp Feature: domain Description: GIIM Note: maturase Location: 422-656 bp Feature: domain Description: McrA Location: 704-956 bp Feature: domain Description: McrA Location: 704-956 bp Feature: gene Location: 1259-1933 bp Feature: domain Description: PRK10717 Location: 1265-1919 bp Feature: domain Description: PRK10717 Location: 12 65-1919 bp Feature: gene Location: 1949-2197 bp Feature: domain Description: TRX_Fd_family Location: 1976-2183 bp Feature: domain Description: TRX_Fd_family Location: 1976-2183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK10717 (cysteine synthase A; Provisional), TRX_Fd_family (cd02980)

Seq: PKDM01000650.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000023270, whole genome shotgun sequence (3200 bp)
Overview 1 RT 1: 1-2954 bp Neighborhood of RT #1 [1, 2998] YfmG Avd_like RVT-DGRs YfmG Feature: gene Location: 1-336 bp Feature: domain Description: YfmG Location: 10-313 bp Feature: domain Description: YfmG Location: 10-313 bp Feature: gene Location: 433-774 bp Feature: domain Description: Avd_like Location: 451-760 bp Feature: domain Description: Avd_like Location: 451-760 bp Feature: gene Location: 799-1863 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1009-1648 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1009-1648 bp Feature: gene Location: 1923-2153 bp Feature: gene Location: 2225-2998 bp Feature: domain Description: YfmG Location: 2276-2954 bp Feature: domain Description: YfmG Location: 2276-2954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: PKDM01000988.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000031251, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 201-2205 bp Neighborhood of RT #1 [201, 2711] RVT_N RVT-GII GIIM Feature: gene Location: 201-587 bp Feature: domain Description: RVT_N Location: 318-552 bp Feature: domain Description: RVT_N Location: 318-552 bp Feature: gene Location: 818-1087 bp Feature: gene Location: 1329-2711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1332-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1332-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1974-2205 bp Feature: domain Description: GIIM Note: maturase Location: 1974-2205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PKDM01000766.1 Cyanobacterium Cyano2 isolate Cyano2 c_000000031298, whole genome shotgun sequence (2711 bp)
Overview 1 RT 1: 218-2268 bp Neighborhood of RT #1 [218, 2276] RVT_N RVT-GII HNH PRK05643 Feature: gene Location: 218-988 bp Feature: domain Description: RVT_N Location: 335-578 bp Feature: domain Description: RVT_N Location: 335-578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-860 bp Feature: gene Location: 1164-1307 bp Feature: domain Description: HNH Note: nucleases Location: 1179-1281 bp Feature: domain Description: HNH Note: nucleases Location: 1179-1281 bp Feature: gene Location: 1506-2276 bp Feature: domain Description: PRK05643 Location: 1515-2268 bp Feature: domain Description: PRK05643 Location: 15 15 -2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HNH (pfam01844), PRK05643 (DNA polymerase III subunit beta; Validated)