myRT

myRT report for GCA_002863645.1_ASM286364v1

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Seq: CM009132.1 Psychrobacter sp. MES7-P7E plasmid unnamed1, complete sequence, whole genome shotgun sequence (14711 bp)
Overview 1 RT 1: 10326-14374 bp Neighborhood of RT #1 [10326, 14374] Rep_3 RVT-G2L Feature: gene Location: 10326-10700 bp Feature: gene Location: 11318-12247 bp Feature: domain Description: Rep_3 Location: 11324-11984 bp Feature: domain Description: Rep_3 Location: 1 1 324-1 1 984 bp Feature: gene Location: 12375-13706 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 12642-13365 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 1 2642-1 3365 bp Feature: gene Location: 13721-14374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), RVT-G2L

Seq: PJBU01000094.1 Psychrobacter sp. MES7-P7E contig19, whole genome shotgun sequence (66573 bp)
Overview 1 RT 1: 35914-51285 bp Neighborhood of RT #1 [35914, 51386] DUF819 UvrA UvrA RVT-Retrons WD40 WD40 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 35914-37101 bp Feature: domain Description: DUF819 Location: 35926-37084 bp Feature: domain Description: DUF819 Location: 3592 6-37084 bp Feature: gene Location: 37339-39906 bp Feature: domain Description: UvrA Location: 37417-37768 bp Feature: domain Description: UvrA Location: 37417-37768 bp Feature: domain Description: UvrA Location: 37795-39901 bp Feature: domain Description: UvrA Location: 37795-39901 bp Feature: gene Location: 40000-41439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40504-41200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40504-412 00 bp Feature: gene Location: 41443-43719 bp Feature: gene Location: 43716-51386 bp Feature: domain Description: WD40 Location: 43953-44433 bp Feature: domain Description: WD40 Location: 43953-44433 bp Feature: domain Description: WD40 Location: 44496-44577 bp Feature: domain Description: WD40 Location: 44496-44577 bp Feature: domain Description: HEAT_2 Location: 44901-45162 bp Feature: domain Description: HEAT_2 Location: 44901-45162 bp Feature: domain Description: HEAT Location: 45210-45291 bp Feature: domain Description: HEAT Location: 452 10-452 91 bp Feature: domain Description: HEAT_2 Location: 45780-46035 bp Feature: domain Description: HEAT_2 Location: 45780-46035 bp Feature: domain Description: HEAT_2 Location: 49458-49668 bp Feature: domain Description: HEAT_2 Location: 49458-49668 bp Feature: domain Description: HEAT_2 Location: 51162-51285 bp Feature: domain Description: HEAT_2 Location: 51162 -512 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF819 (pfam05684), UvrA (COG0178), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646), HEAT (sd00044)

Seq: PJBU01000114.1 Psychrobacter sp. MES7-P7E contig4, whole genome shotgun sequence (133554 bp)
Overview 1 RT 1: 51159-55109 bp Neighborhood of RT #1 [51159, 55111] PLDc_Nuc_like_unchar2 RVT-Retrons PRK15421 potC Feature: gene Location: 51159-51854 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 51261-51789 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 51261-51789 bp Feature: gene Location: 51869-52114 bp Feature: gene Location: 52144-52896 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52192-52729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52192-52729 bp Feature: gene Location: 53310-54200 bp Feature: domain Description: PRK15421 Location: 53313-54156 bp Feature: domain Description: PRK15421 Location: 53 3 13 -54156 bp Feature: gene Location: 54305-55111 bp Feature: domain Description: potC Location: 54365-55109 bp Feature: domain Description: potC Location: 543 65-55109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_Nuc_like_unchar2 (cd09174), RVT-Retrons, PRK15421 (HTH-type transcriptional regulator MetR), potC (PRK09500)

Seq: PJBU01000008.1 Psychrobacter sp. MES7-P7E contig57, whole genome shotgun sequence (12904 bp)
Overview 1 RT 1: 3-3029 bp Neighborhood of RT #1 [3, 3034] RVT-UG3 COG3676 COG3676 CzcD Feature: gene Location: 3-794 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 294-789 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 294 -789 bp Feature: gene Location: 1138-1788 bp Feature: domain Description: COG3676 Location: 1141-1297 bp Feature: domain Description: COG3676 Location: 114 1-1297 bp Feature: domain Description: COG3676 Location: 1312-1594 bp Feature: domain Description: COG3676 Location: 1312-1594 bp Feature: gene Location: 2054-3034 bp Feature: domain Description: CzcD Location: 2453-3029 bp Feature: domain Description: CzcD Location: 24 53-3029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, COG3676 (Transposase and inactivated derivatives ), CzcD (COG1230)

Seq: PJBU01000033.1 Psychrobacter sp. MES7-P7E contig82, whole genome shotgun sequence (1750 bp)
Overview 1 RT 1: 1-694 bp Neighborhood of RT #1 [1, 1680] RVT-UG8 Feature: gene Location: 1-1680 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 247-694 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 247-694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8