myRT

myRT report for GCA_002864045.1_ASM286404v1

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Seq: PJPV01000101.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_101, whole genome shotgun sequence (33037 bp)
Overview 1 RT 1: 46-2086 bp Neighborhood of RT #1 [46, 2086] RVT-GII GIIM RVT-GII Feature: gene Location: 46-714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49-325 bp Feature: domain Description: GIIM Note: maturase Location: 403-628 bp Feature: domain Description: GIIM Note: maturase Location: 403-628 bp Feature: gene Location: 711-1355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1 287 bp Feature: gene Location: 1381-1575 bp Feature: gene Location: 1643-2086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PJPV01000104.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_104, whole genome shotgun sequence (4731 bp)
Overview 1 RT 1: 1245-4696 bp Neighborhood of RT #1 [1245, 4701] LYZ2 LYZ2 HTH_32 RVT-GII Feature: gene Location: 1245-2342 bp Feature: domain Description: LYZ2 Location: 1929-2022 bp Feature: domain Description: LYZ2 Location: 192 9-2 02 2 bp Feature: domain Description: LYZ2 Location: 2112-2205 bp Feature: domain Description: LYZ2 Location: 2 112 -2 2 05 bp Feature: gene Location: 3019-3702 bp Feature: domain Description: HTH_32 Location: 3256-3475 bp Feature: domain Description: HTH_32 Location: 32 56-3475 bp Feature: gene Location: 4261-4701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4534-4696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4534-4696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LYZ2 (smart00047), HTH_32 (pfam13565), RVT-GII

Seq: PJPV01000136.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_136, whole genome shotgun sequence (64302 bp)
Overview 1 RT 1: 2704-4435 bp Neighborhood of RT #1 [2704, 4464] RVT-GII HTH_36 Feature: gene Location: 2704-2835 bp Feature: gene Location: 2941-3171 bp Feature: gene Location: 3521-3808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3713-3800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 713 -3 800 bp Feature: gene Location: 3873-4097 bp Feature: gene Location: 4156-4464 bp Feature: domain Description: HTH_36 Location: 4354-4435 bp Feature: domain Description: HTH_3 6 Location: 43 54-443 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_36 (pfam13730)

Seq: PJPV01000169.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_169, whole genome shotgun sequence (56007 bp)
Overview 1 RT 1: 36290-38693 bp Neighborhood of RT #1 [36290, 38701] RVT-GII RVT-GII GIIM TPR TPR Feature: gene Location: 36290-36442 bp Feature: gene Location: 36532-36660 bp Feature: gene Location: 36806-37300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37013-37244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37013-3724 4 bp Feature: gene Location: 37314-38117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37317-37680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37317-37680 bp Feature: domain Description: GIIM Note: maturase Location: 37722-37944 bp Feature: domain Description: GIIM Note: maturase Location: 37722-3794 4 bp Feature: gene Location: 38207-38413 bp Feature: domain Description: TPR Location: 38231-38360 bp Feature: domain Description: TPR Location: 38231-38360 bp Feature: gene Location: 38459-38701 bp Feature: domain Description: TPR Location: 38516-38693 bp Feature: domain Description: TPR Location: 38516-38693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TPR (smart00028)

Seq: PJPV01000229.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_229, whole genome shotgun sequence (2119 bp)
Overview 1 RT 1: 2-2026 bp Neighborhood of RT #1 [2, 2031] RVT-GII RVT-GII GIIM RVT-GII Feature: gene Location: 2-202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -194 bp Feature: gene Location: 183-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-621 bp Feature: gene Location: 856-984 bp Feature: gene Location: 1380-1853 bp Feature: domain Description: GIIM Note: maturase Location: 1458-1680 bp Feature: domain Description: GIIM Note: maturase Location: 145 8-1680 bp Feature: gene Location: 1864-2031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1897-2026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1897-2026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PJPV01000261.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_261, whole genome shotgun sequence (7566 bp)
Overview 1 RT 1: 4727-6622 bp Neighborhood of RT #1 [4727, 6996] OYE_like_4_FMN RVT-GII Feature: gene Location: 4727-5212 bp Feature: domain Description: OYE_like_4_FMN Location: 4760-5024 bp Feature: domain Description: OYE_like_4_FMN Location: 476 0-5024 bp Feature: gene Location: 5299-5451 bp Feature: gene Location: 5689-6996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5944-6622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5944-6 6 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OYE_like_4_FMN (cd04735), RVT-GII

Seq: PJPV01000027.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_27, whole genome shotgun sequence (39770 bp)
Overview 1 RT 1: 37933-39768 bp Neighborhood of RT #1 [37933, 39768] Tra5 GIIM RVT-GII Feature: gene Location: 37933-38538 bp Feature: domain Description: Tra5 Location: 37939-38380 bp Feature: domain Description: Tra5 Location: 37 939-38380 bp Feature: gene Location: 38640-39026 bp Feature: domain Description: GIIM Note: maturase Location: 38649-38805 bp Feature: domain Description: GIIM Note: maturase Location: 38649-38805 bp Feature: gene Location: 39094-39519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39115-39496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39115-39496 bp Feature: gene Location: 39541-39768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), GIIM (pfam08388), RVT-GII

Seq: PJPV01000060.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_60, whole genome shotgun sequence (22503 bp)
Overview 1 RT 1: 17223-20527 bp Neighborhood of RT #1 [17223, 20541] RVT-Retrons COG4333 Feature: gene Location: 17223-17387 bp Feature: gene Location: 17450-17842 bp Feature: gene Location: 17886-19280 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18234-18813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18 234-18 8 13 bp Feature: gene Location: 19267-19995 bp Feature: gene Location: 20074-20541 bp Feature: domain Description: COG4333 Location: 20077-20527 bp Feature: domain Description: COG4333 Location: 20077-20527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG4333 (Uncharacterized protein )

Seq: PJPV01000061.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_61, whole genome shotgun sequence (63579 bp)
Overview 1 RT 1: 3-2611 bp Neighborhood of RT #1 [3, 2611] InsA DDE_Tnp_IS1595 RVT-GII Feature: gene Location: 3-551 bp Feature: domain Description: InsA Location: 93-342 bp Feature: domain Description: InsA Location: 9 3-342 bp Feature: gene Location: 577-975 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 580-919 bp Feature: domain Description: DDE_Tnp_IS159 5 Location: 580-9 19 bp Feature: gene Location: 1089-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1749 bp Feature: gene Location: 1860-2084 bp Feature: gene Location: 2417-2611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1595 (pfam12762), RVT-GII

Seq: PJPV01000077.1 Endozoicomonas acroporae strain Acr-14 Endozoicomoas_acroporae_sp._Acr-14_contig_77, whole genome shotgun sequence (61286 bp)
Overview 1 RT 1: 56954-61088 bp Neighborhood of RT #1 [56954, 61177] RVT-GII RVT-GII Feature: gene Location: 56954-57250 bp Feature: gene Location: 57466-57618 bp Feature: gene Location: 58376-59305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58568-59033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58568-59033 bp Feature: gene Location: 59572-59847 bp Feature: gene Location: 60329-60457 bp Feature: gene Location: 60593-60787 bp Feature: gene Location: 60797-61177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60857-61088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60857-610 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII