myRT

myRT report for GCA_002864905.1_ASM286490v1

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Seq: PJCK01000025.1 Pseudomonas plecoglossicida strain MR70 MR70_25, whole genome shotgun sequence (90379 bp)
Overview 1 RT 1: 952-3751 bp Neighborhood of RT #1 [952, 4251] RVT-GII TnpB_IS66 Feature: gene Location: 952-2718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1636-2326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 636-2326 bp Feature: gene Location: 3062-3391 bp Feature: gene Location: 3442-4251 bp Feature: domain Description: TnpB_IS66 Location: 3469-3751 bp Feature: domain Description: TnpB_IS66 Location: 3469-3751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII

Seq: PJCK01000028.1 Pseudomonas plecoglossicida strain MR70 MR70_28, whole genome shotgun sequence (78435 bp)
Overview 1 RT 1: 45061-49764 bp Neighborhood of RT #1 [45061, 49764] HDc DDE_Tnp_IS66_C RVT_N RVT-GII GIIM COG3436 DDE_Tnp_IS66 Feature: gene Location: 45061-45864 bp Feature: domain Description: HDc Location: 45262-45637 bp Feature: domain Description: HDc Location: 452 62 -45637 bp Feature: gene Location: 45900-46034 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 45906-46017 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 45906-46017 bp Feature: gene Location: 46226-47785 bp Feature: RT Description: RVT_N Location: 46229-46412 bp Feature: RT Description: RVT_N Location: 462 2 9-46412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46457-47093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46457-47093 bp Feature: domain Description: GIIM Note: maturase Location: 47150-47378 bp Feature: domain Description: GIIM Note: maturase Location: 47150-47378 bp Feature: gene Location: 48260-49501 bp Feature: domain Description: COG3436 Location: 48671-48965 bp Feature: domain Description: COG3436 Location: 48671-48965 bp Feature: domain Description: DDE_Tnp_IS66 Location: 48980-49298 bp Feature: domain Description: DDE_Tnp_IS66 Location: 48980-492 98 bp Feature: gene Location: 49573-49764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDc (smart00471), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050)