myRT

myRT report for GCA_002865005.1_ASM286500v1

Download annotations/find similar RTs

Seq: NBUD01000118.1 Sinorhizobium medicae strain Str15 scaffold2.1, whole genome shotgun sequence (157102 bp)
Overview 1 RT 1: 1035-4749 bp Neighborhood of RT #1 [1035, 4802] COG3436 RVT-GII RVT-GII RVT_1 GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1035-1796 bp Feature: domain Description: COG3436 Location: 1284-1761 bp Feature: domain Description: COG3436 Location: 1 284-1 761 bp Feature: gene Location: 1856-2869 bp Feature: gene Location: 2309-2623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2525-2609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2525-2609 bp Feature: gene Location: 2657-3736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660-3128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660-31 28 bp Feature: RT Description: RVT_1 Location: 3134-3350 bp Feature: RT Description: RVT_1 Location: 31 34-3350 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3644 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3644 bp Feature: gene Location: 3790-4356 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3823-4285 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3823-4285 bp Feature: gene Location: 4386-4802 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4389-4611 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4389-461 1 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4632-4749 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4632-4749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: NBUD01000003.1 Sinorhizobium medicae strain Str15 scaffold67.1, whole genome shotgun sequence (10137 bp)
Overview 1 RT 1: 212-4111 bp Neighborhood of RT #1 [212, 4111] COG3415 RVT-GII GIIM COG3335 Feature: gene Location: 212-619 bp Feature: domain Description: COG3415 Location: 215-617 bp Feature: domain Description: COG3415 Location: 2 15-617 bp Feature: gene Location: 1214-2473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430-2 084 bp Feature: domain Description: GIIM Note: maturase Location: 2165-2387 bp Feature: domain Description: GIIM Note: maturase Location: 2 165-2 387 bp Feature: gene Location: 2569-3042 bp Feature: domain Description: COG3335 Location: 2647-3031 bp Feature: domain Description: COG3335 Location: 2 647-3031 bp Feature: gene Location: 3326-4111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), COG3335 (Transposase )