myRT

myRT report for GCA_002865025.1_ASM286502v1

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Seq: NBUE01000101.1 Sinorhizobium medicae strain Str14 scaffold48.1, whole genome shotgun sequence (6362 bp)
Overview 1 RT 1: 629-3806 bp Neighborhood of RT #1 [629, 3880] RVT-GII Intron_maturas2 HNHc Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 629-2545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896-1733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896-1 733 bp Feature: domain Description: Intron_maturas2 Location: 1814-2102 bp Feature: domain Description: Intron_maturas2 Location: 1 81 4-21 02 bp Feature: domain Description: HNHc Note: nucleases Location: 2267-2426 bp Feature: domain Description: HNHc Note: nucleases Location: 2267-2426 bp Feature: gene Location: 2617-2772 bp Feature: gene Location: 2888-3880 bp Feature: domain Description: Phage_int_SAM_1 Location: 2930-3173 bp Feature: domain Description: Phage_int_SAM_1 Location: 2930-31 73 bp Feature: domain Description: INT_RitC_C_like Location: 3266-3806 bp Feature: domain Description: INT_RitC_C_like Location: 3266-3806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NBUE01000114.1 Sinorhizobium medicae strain Str14 scaffold71.1, whole genome shotgun sequence (19927 bp)
Overview 1 RT 1: 15474-19463 bp Neighborhood of RT #1 [15474, 19564] COG3436 RVT-GII RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C ygfB_yecA Feature: gene Location: 15474-16235 bp Feature: domain Description: COG3436 Location: 15723-16200 bp Feature: domain Description: COG3436 Location: 1572 3-162 00 bp Feature: gene Location: 16295-17203 bp Feature: gene Location: 16748-17467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16964-17462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16964-17462 bp Feature: gene Location: 17518-18078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17521-17689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752 1-17689 bp Feature: domain Description: GIIM Note: maturase Location: 17770-17986 bp Feature: domain Description: GIIM Note: maturase Location: 17770-17986 bp Feature: gene Location: 18132-19004 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18165-18813 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18165-18813 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18834-18951 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18834-18951 bp Feature: gene Location: 19001-19564 bp Feature: domain Description: ygfB_yecA Location: 19058-19463 bp Feature: domain Description: ygfB_yecA Location: 19058-19463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), ygfB_yecA (TIGR02292)