myRT

myRT report for GCA_002865205.1_ASM286520v1

Download annotations/find similar RTs

Seq: NBUN01001040.1 Sinorhizobium medicae strain Str5 scaffold23.1, whole genome shotgun sequence (7624 bp)
Overview 1 RT 1: 3472-7461 bp Neighborhood of RT #1 [3472, 7562] COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C ygfB_yecA Feature: gene Location: 3472-4233 bp Feature: domain Description: COG3436 Location: 3721-4198 bp Feature: domain Description: COG3436 Location: 3721 -41 98 bp Feature: gene Location: 4293-5495 bp Feature: gene Location: 5516-6076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5519-5687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 9-5687 bp Feature: domain Description: GIIM Note: maturase Location: 5768-5984 bp Feature: domain Description: GIIM Note: maturase Location: 5768-5984 bp Feature: gene Location: 6130-7002 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6163-6811 bp Feature: domain Description: DDE_Tnp_IS66 Location: 61 63-681 1 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6832-6949 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6832-6949 bp Feature: gene Location: 6999-7562 bp Feature: domain Description: ygfB_yecA Location: 7056-7461 bp Feature: domain Description: ygfB_yecA Location: 7056-7461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), ygfB_yecA (TIGR02292)

Seq: NBUN01001427.1 Sinorhizobium medicae strain Str5 scaffold671.1, whole genome shotgun sequence (3561 bp)
Overview 1 RT 1: 2-2789 bp Neighborhood of RT #1 [2, 2789] RVT-GII GIIM COG3335 Feature: gene Location: 2-292 bp Feature: gene Location: 321-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 4-948 bp Feature: domain Description: GIIM Note: maturase Location: 1029-1251 bp Feature: domain Description: GIIM Note: maturase Location: 102 9-12 51 bp Feature: gene Location: 1433-1906 bp Feature: domain Description: COG3335 Location: 1511-1895 bp Feature: domain Description: COG3335 Location: 1511-1895 bp Feature: gene Location: 2190-2789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3335 (Transposase ), RVT-GII, GIIM (pfam08388)