myRT

myRT report for GCA_002865215.1_ASM286521v1

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Seq: NBUO01000380.1 Sinorhizobium medicae strain Str4 scaffold121.1, whole genome shotgun sequence (12323 bp)
Overview 1 RT 1: 5990-10114 bp Neighborhood of RT #1 [5990, 10215] COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C ygfB_yecA Feature: gene Location: 5990-6751 bp Feature: domain Description: COG3436 Location: 6239-6716 bp Feature: domain Description: COG3436 Location: 6239-671 6 bp Feature: gene Location: 6882-7790 bp Feature: gene Location: 7335-8594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7551-8205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7551 -8205 bp Feature: domain Description: GIIM Note: maturase Location: 8286-8502 bp Feature: domain Description: GIIM Note: maturase Location: 8286-8502 bp Feature: gene Location: 8648-9655 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8681-9122 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8681 -91 22 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9128-9464 bp Feature: domain Description: DDE_Tnp_IS66 Location: 91 28-9464 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9485-9602 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9485-9602 bp Feature: gene Location: 9652-10215 bp Feature: domain Description: ygfB_yecA Location: 9709-10114 bp Feature: domain Description: ygfB_yecA Location: 9709-1 01 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), ygfB_yecA (TIGR02292)

Seq: NBUO01000053.1 Sinorhizobium medicae strain Str4 scaffold163.1, whole genome shotgun sequence (9162 bp)
Overview 1 RT 1: 1-3897 bp Neighborhood of RT #1 [1, 3897] COG3415 RVT-GII RVT-GII GIIM COG3335 Feature: gene Location: 1-369 bp Feature: domain Description: COG3415 Location: 4-367 bp Feature: domain Description: COG3415 Location: 4-367 bp Feature: gene Location: 1120-2259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402 -1870 bp Feature: domain Description: GIIM Note: maturase Location: 1951-2173 bp Feature: domain Description: GIIM Note: maturase Location: 1951-2 173 bp Feature: gene Location: 2355-2828 bp Feature: domain Description: COG3335 Location: 2433-2817 bp Feature: domain Description: COG3335 Location: 2 433-2 817 bp Feature: gene Location: 3112-3897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), COG3335 (Transposase )