myRT

myRT report for GCA_002865385.1_ASM286538v1

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Seq: NIHV01000012.1 [Ruminococcus] gnavus strain RJX1127 RJX1127_12, whole genome shotgun sequence (123929 bp)
Overview 1 RT 1: 114249-119009 bp Neighborhood of RT #1 [114249, 119009] 7tmA_mAChR_GAR-2-like RVT-DGRs Feature: gene Location: 114249-116618 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 114714-115236 bp Feature: domain Description: 7tmA_mAChR_GAR-2-like Location: 1 1 471 4-1 1 5236 bp Feature: gene Location: 116816-116965 bp Feature: gene Location: 117128-118399 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 117428-118088 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 7428-1 1 8088 bp Feature: gene Location: 118679-118825 bp Feature: gene Location: 118818-119009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_mAChR_GAR-2-like (cd15302), RVT-DGRs

Seq: NIHV01000003.1 [Ruminococcus] gnavus strain RJX1127 RJX1127_3, whole genome shotgun sequence (192431 bp)
Overview 1 RT 1: 6027-9747 bp 2 RT 2: 12291-17240 bp Neighborhood of RT #1 [6027, 9747] DUF3847 Ssb RVT-GII GIIM Neighborhood of RT #2 [12291, 17299] HTH_32 rve pepcterm_ATPase RVT-GII COG3666 DDE_Tnp_1_6 Feature: gene Location: 6027-6542 bp Feature: domain Description: DUF3847 Location: 6171-6408 bp Feature: domain Description: DUF3847 Location: 6171-6408 bp Feature: gene Location: 6652-7056 bp Feature: domain Description: Ssb Location: 6655-6997 bp Feature: domain Description: Ssb Location: 6655-6997 bp Feature: gene Location: 7333-8724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7648-8272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7648-82 72 bp Feature: domain Description: GIIM Note: maturase Location: 8329-8545 bp Feature: domain Description: GIIM Note: maturase Location: 832 9-8545 bp Feature: gene Location: 8762-8917 bp Feature: gene Location: 9316-9747 bp Feature: gene Location: 12291-13544 bp Feature: domain Description: HTH_32 Location: 12471-12699 bp Feature: domain Description: HTH_32 Location: 12 471-12 699 bp Feature: domain Description: rve Location: 12765-13122 bp Feature: domain Description: rve Location: 12 765-1312 2 bp Feature: gene Location: 13526-14350 bp Feature: domain Description: pepcterm_ATPase Location: 13556-14339 bp Feature: domain Description: pepcterm_ATPase Location: 13556-14339 bp Feature: gene Location: 14435-14896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14639-14816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14639-14816 bp Feature: gene Location: 14995-15378 bp Feature: gene Location: 15497-17299 bp Feature: domain Description: COG3666 Location: 15626-16034 bp Feature: domain Description: COG3666 Location: 1562 6-16034 bp Feature: domain Description: DDE_Tnp_1_6 Location: 16847-17240 bp Feature: domain Description: DDE_Tnp_1_6 Location: 16847-172 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3847 (pfam12958), Ssb (COG0629), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), rve (pfam00665), pepcterm_ATPase (TIGR03015), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: NIHV01000008.1 [Ruminococcus] gnavus strain RJX1127 RJX1127_8, whole genome shotgun sequence (142821 bp)
Overview 1 RT 1: 76840-80254 bp 2 RT 2: 93235-96939 bp Neighborhood of RT #1 [76840, 80274] RVT-DGRs Phage_XkdX Neighborhood of RT #2 [93235, 97202] RVT-GII Intron_maturas2 HTH_32 Feature: gene Location: 76840-78135 bp Feature: gene Location: 78229-78393 bp Feature: gene Location: 78500-79885 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78713-79457 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78713 -79457 bp Feature: gene Location: 79794-80120 bp Feature: gene Location: 80122-80274 bp Feature: domain Description: Phage_XkdX Location: 80143-80254 bp Feature: domain Description: Phage_XkdX Location: 80143 -80254 bp Feature: gene Location: 93235-93903 bp Feature: gene Location: 94018-94476 bp Feature: gene Location: 94478-96094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94742-95573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94742-95573 bp Feature: domain Description: Intron_maturas2 Location: 95645-95960 bp Feature: domain Description: Intron_maturas2 Location: 95645-95960 bp Feature: gene Location: 95973-96725 bp Feature: gene Location: 96750-97202 bp Feature: domain Description: HTH_32 Location: 96771-96939 bp Feature: domain Description: HTH_3 2 Location: 96771-9693 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693), RVT-GII, Intron_maturas2 (pfam01348), HTH_32 (pfam13565)