myRT

myRT report for GCA_002866165.1_ASM286616v1

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Seq: LTCP01000189.1 Streptococcus pneumoniae strain NTPn 154 NTPn_154_contig_7, whole genome shotgun sequence (30248 bp)
Overview 1 RT 1: 25898-29432 bp Neighborhood of RT #1 [25898, 29602] COG5340 AbiEii RVT-GII cas_Csn1 Feature: gene Location: 25898-26488 bp Feature: domain Description: COG5340 Location: 25901-26333 bp Feature: domain Description: COG5340 Location: 25901 -26333 bp Feature: gene Location: 26485-27330 bp Feature: domain Description: AbiEii Location: 26584-27283 bp Feature: domain Description: AbiEii Location: 26584-27283 bp Feature: gene Location: 27680-29602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28007-28742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28007-28742 bp Feature: domain Description: cas_Csn1 Location: 29153-29432 bp Feature: domain Description: cas_Csn1 Location: 291 53-29432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865)

Seq: LTCP01000216.1 Streptococcus pneumoniae strain NTPn 154 NTPn_154_contig_94, whole genome shotgun sequence (1785 bp)
Overview 1 RT 1: 165-1783 bp Neighborhood of RT #1 [165, 1783] RVT-GII GIIM Feature: gene Location: 165-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-984 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1251 bp Feature: domain Description: GIIM Note: maturase Location: 1038-12 51 bp Feature: gene Location: 1631-1783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)