myRT

myRT report for GCA_002866305.1_ASM286630v1

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Seq: LTCL01000193.1 Streptococcus pneumoniae strain NTPn 124 NTPn_124_contig_54, whole genome shotgun sequence (25582 bp)
Overview 1 RT 1: 21621-24689 bp Neighborhood of RT #1 [21621, 24781] DUF2969 rpsA RVT-GII GIIM Feature: gene Location: 21621-21851 bp Feature: domain Description: DUF2969 Location: 21624-21843 bp Feature: domain Description: DUF2969 Location: 21 624-21 843 bp Feature: gene Location: 22224-23426 bp Feature: domain Description: rpsA Location: 22227-23415 bp Feature: domain Description: rpsA Location: 22227-2341 5 bp Feature: gene Location: 23603-24781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23807-24422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23807-24422 bp Feature: domain Description: GIIM Note: maturase Location: 24476-24689 bp Feature: domain Description: GIIM Note: maturase Location: 24476-24689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2969 (pfam11184), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)

Seq: LTCL01000198.1 Streptococcus pneumoniae strain NTPn 124 NTPn_124_contig_59, whole genome shotgun sequence (18360 bp)
Overview 1 RT 1: 14822-17644 bp Neighborhood of RT #1 [14822, 17814] RVT-GII cas_Csn1 Feature: gene Location: 14822-14986 bp Feature: gene Location: 14988-15596 bp Feature: gene Location: 15892-17814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16219-16954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 19-16954 bp Feature: domain Description: cas_Csn1 Location: 17365-17644 bp Feature: domain Description: cas_Csn1 Location: 17365-17644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865)