myRT

myRT report for GCA_002866325.1_ASM286632v1

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Seq: LTCM01000111.1 Streptococcus pneumoniae strain NTPn 130 NTPn_130_contig_2, whole genome shotgun sequence (67129 bp)
Overview 1 RT 1: 25777-35034 bp Neighborhood of RT #1 [25777, 35216] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 25777-26367 bp Feature: domain Description: COG5340 Location: 25780-26212 bp Feature: domain Description: COG5340 Location: 25780-2621 2 bp Feature: gene Location: 26364-27209 bp Feature: domain Description: AbiEii Location: 26463-27162 bp Feature: domain Description: AbiEii Location: 26463-271 62 bp Feature: gene Location: 27559-29481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27886-28621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27886-28621 bp Feature: domain Description: cas_Csn1 Location: 29032-29311 bp Feature: domain Description: cas_Csn1 Location: 29032-2931 1 bp Feature: gene Location: 30190-32868 bp Feature: domain Description: Peptidase_M23 Location: 31636-31840 bp Feature: domain Description: Peptidase_M23 Location: 31 636-31 840 bp Feature: domain Description: Phage_lysozyme2 Location: 31993-32500 bp Feature: domain Description: Phage_lysozyme2 Location: 31 993-32500 bp Feature: domain Description: COG3942 Location: 32620-32851 bp Feature: domain Description: COG3942 Location: 32620-32851 bp Feature: gene Location: 32865-35216 bp Feature: domain Description: TraC-F-type Location: 33651-35034 bp Feature: domain Description: TraC-F-type Location: 33651 -35034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)

Seq: LTCM01000209.1 Streptococcus pneumoniae strain NTPn 130 NTPn_130_contig_7, whole genome shotgun sequence (31558 bp)
Overview 1 RT 1: 17824-22141 bp Neighborhood of RT #1 [17824, 22141] DUF3687 MFS_MefA_like RVT-GII GIIM Feature: gene Location: 17824-17955 bp Feature: domain Description: DUF3687 Location: 17836-17953 bp Feature: domain Description: DUF3687 Location: 17836-17953 bp Feature: gene Location: 18269-19447 bp Feature: domain Description: MFS_MefA_like Location: 18284-19427 bp Feature: domain Description: MFS_MefA_like Location: 182 84-1942 7 bp Feature: gene Location: 19908-21185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20112-20727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0112 -2 072 7 bp Feature: domain Description: GIIM Note: maturase Location: 20781-20994 bp Feature: domain Description: GIIM Note: maturase Location: 2 0781-2 0994 bp Feature: gene Location: 21527-21736 bp Feature: gene Location: 21944-22141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)