myRT

myRT report for GCA_002866345.1_ASM286634v1

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Seq: LTCN01000007.1 Streptococcus pseudopneumoniae strain NTPn 138 NTPn_138_contig_104, whole genome shotgun sequence (48045 bp)
Overview 1 RT 1: 10653-19527 bp Neighborhood of RT #1 [10653, 19538] rexB_recomb INT_ICEBs1_C_like RVT-GII GIIM eno TIGR00045 Feature: gene Location: 10653-13952 bp Feature: domain Description: rexB_recomb Location: 10683-13905 bp Feature: domain Description: rexB_recomb Location: 1 0683-1 3905 bp Feature: gene Location: 14512-14760 bp Feature: domain Description: INT_ICEBs1_C_like Location: 14530-14695 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 4530-1 4695 bp Feature: gene Location: 14844-16121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15048-15663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5048-1 5663 bp Feature: domain Description: GIIM Note: maturase Location: 15717-15930 bp Feature: domain Description: GIIM Note: maturase Location: 1 571 7-1 5930 bp Feature: gene Location: 16782-18086 bp Feature: domain Description: eno Location: 16785-18078 bp Feature: domain Description: eno Location: 1 6785-1 8078 bp Feature: gene Location: 18693-19538 bp Feature: domain Description: TIGR00045 Location: 18702-19527 bp Feature: domain Description: TIGR00045 Location: 1 8702-1 9527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), INT_ICEBs1_C_like (cd01189), RVT-GII, GIIM (pfam08388), eno (TIGR01060), TIGR00045 (glycerate kinase)

Seq: LTCN01000029.1 Streptococcus pseudopneumoniae strain NTPn 138 NTPn_138_contig_124, whole genome shotgun sequence (1595 bp)
Overview 1 RT 1: 1-1547 bp Neighborhood of RT #1 [1, 1549] YeiH RVT-GII RVT-GII Feature: gene Location: 1-240 bp Feature: domain Description: YeiH Location: 7-229 bp Feature: domain Description: YeiH Location: 7-2 2 9 bp Feature: gene Location: 868-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072-1159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072 -1159 bp Feature: gene Location: 1187-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190-1547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YeiH (COG2855)

Seq: LTCN01000124.1 Streptococcus pseudopneumoniae strain NTPn 138 NTPn_138_contig_31, whole genome shotgun sequence (36812 bp)
Overview 1 RT 1: 5560-9570 bp Neighborhood of RT #1 [5560, 9572] YqgV RVT-GII GIIM RVT-GII COG3942 CW_binding_1 CW_binding_1 CW_binding_1 CW_binding_1 COG4466 Feature: gene Location: 5560-5901 bp Feature: domain Description: YqgV Location: 5614-5896 bp Feature: domain Description: YqgV Location: 5614-5896 bp Feature: gene Location: 5904-6044 bp Feature: gene Location: 6145-7005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6148-6559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6148-6559 bp Feature: domain Description: GIIM Note: maturase Location: 6613-6826 bp Feature: domain Description: GIIM Note: maturase Location: 6613 -6826 bp Feature: gene Location: 7022-7324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7226-7313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7226-73 13 bp Feature: gene Location: 8099-9217 bp Feature: domain Description: COG3942 Location: 8105-8753 bp Feature: domain Description: COG3 942 Location: 8105-8753 bp Feature: domain Description: CW_binding_1 Location: 8930-8978 bp Feature: domain Description: CW_binding_1 Location: 893 0-8978 bp Feature: domain Description: CW_binding_1 Location: 8987-9041 bp Feature: domain Description: CW_binding_1 Location: 8987-9041 bp Feature: domain Description: CW_binding_1 Location: 9047-9101 bp Feature: domain Description: CW_binding_1 Location: 9047-9101 bp Feature: domain Description: CW_binding_1 Location: 9107-9158 bp Feature: domain Description: CW_binding_1 Location: 9107-9158 bp Feature: gene Location: 9306-9572 bp Feature: domain Description: COG4466 Location: 9321-9570 bp Feature: domain Description: COG4466 Location: 93 21-9570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), RVT-GII, GIIM (pfam08388), COG3942 (Surface antigen ), CW_binding_1 (pfam01473), COG4466 (Uncharacterized protein Veg, DUF1021 family )