myRT

myRT report for GCA_002866375.1_ASM286637v1

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Seq: LTCS01000068.1 Streptococcus pneumoniae strain NTPn 203 NTPn_203_contig_16, whole genome shotgun sequence (40177 bp)
Overview 1 RT 1: 21693-30950 bp Neighborhood of RT #1 [21693, 31132] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 21693-22283 bp Feature: domain Description: COG5340 Location: 21696-22128 bp Feature: domain Description: COG5340 Location: 21 696-221 28 bp Feature: gene Location: 22280-23125 bp Feature: domain Description: AbiEii Location: 22379-23078 bp Feature: domain Description: AbiEii Location: 22379-23078 bp Feature: gene Location: 23475-25397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23802-24537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23802-24537 bp Feature: domain Description: cas_Csn1 Location: 24948-25227 bp Feature: domain Description: cas_Csn1 Location: 24948-25227 bp Feature: gene Location: 26106-28784 bp Feature: domain Description: Peptidase_M23 Location: 27552-27756 bp Feature: domain Description: Peptidase_M23 Location: 27552-27756 bp Feature: domain Description: Phage_lysozyme2 Location: 27909-28416 bp Feature: domain Description: Phage_lysozyme2 Location: 27909-2841 6 bp Feature: domain Description: COG3942 Location: 28536-28767 bp Feature: domain Description: COG3942 Location: 28536-28767 bp Feature: gene Location: 28781-31132 bp Feature: domain Description: TraC-F-type Location: 29567-30950 bp Feature: domain Description: TraC-F-type Location: 29567-30950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)