myRT

myRT report for GCA_002870665.1_ASM287066v1

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Seq: NRQW01000152.1 Fischerella muscicola CCMEE 5323 NODE_202_length_7925_cov_27.553818, whole genome shotgun sequence (7979 bp)
Overview 1 RT 1: 324-7836 bp Neighborhood of RT #1 [324, 7859] RVT-CRISPR cas1 DUF4384 TPR_12 TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 TPR_12 TPR_10 CHAT Feature: gene Location: 324-533 bp Feature: gene Location: 921-2939 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1110-1716 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 1 1 0-1 71 6 bp Feature: domain Description: cas1 Location: 1932-2910 bp Feature: domain Description: cas1 Location: 1 932-291 0 bp Feature: gene Location: 3242-3994 bp Feature: domain Description: DUF4384 Location: 3620-3851 bp Feature: domain Description: DUF4384 Location: 3620-3851 bp Feature: gene Location: 4116-7859 bp Feature: domain Description: TPR_12 Location: 4263-4479 bp Feature: domain Description: TPR_1 2 Location: 4263-4479 bp Feature: domain Description: TPR_12 Location: 4509-4737 bp Feature: domain Description: TPR_1 2 Location: 4509-4737 bp Feature: domain Description: TPR_12 Location: 4764-4989 bp Feature: domain Description: TPR_1 2 Location: 4764-4989 bp Feature: domain Description: TPR_10 Location: 5016-5139 bp Feature: domain Description: TPR_1 0 Location: 501 6-51 39 bp Feature: domain Description: TPR_12 Location: 5139-5367 bp Feature: domain Description: TPR_1 2 Location: 51 39-5367 bp Feature: domain Description: TPR_12 Location: 5391-5604 bp Feature: domain Description: TPR_1 2 Location: 5391 -5604 bp Feature: domain Description: TPR_12 Location: 5646-5865 bp Feature: domain Description: TPR_1 2 Location: 5646-5865 bp Feature: domain Description: TPR_10 Location: 5898-5961 bp Feature: domain Description: TPR_1 0 Location: 5898-5961 bp Feature: domain Description: CHAT Location: 6741-7836 bp Feature: domain Description: CHAT Location: 6741 -7836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1 (TIGR00287), DUF4384 (pfam14326), TPR_12 (pfam13424), TPR_10 (pfam13374), CHAT (pfam12770)

Seq: NRQW01000208.1 Fischerella muscicola CCMEE 5323 NODE_278_length_2279_cov_193.035110, whole genome shotgun sequence (2333 bp)
Overview 1 RT 1: 483-2136 bp Neighborhood of RT #1 [483, 2237] RVT_N RVT-GII GIIM HNH Feature: gene Location: 483-2237 bp Feature: domain Description: RVT_N Location: 531-771 bp Feature: domain Description: RVT_N Location: 531-771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 5-1464 bp Feature: domain Description: GIIM Note: maturase Location: 1539-1770 bp Feature: domain Description: GIIM Note: maturase Location: 1539-1770 bp Feature: domain Description: HNH Note: nucleases Location: 2001-2136 bp Feature: domain Description: HNH Note: nucleases Location: 2 001-2 136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: NRQW01000239.1 Fischerella muscicola CCMEE 5323 NODE_317_length_6908_cov_34.277504, whole genome shotgun sequence (6962 bp)
Overview 1 RT 1: 143-5215 bp Neighborhood of RT #1 [143, 5215] entF RVT-Retrons PRK13654 Feature: gene Location: 143-313 bp Feature: gene Location: 382-2025 bp Feature: domain Description: entF Location: 391-2011 bp Feature: domain Description: entF Location: 3 91-2011 bp Feature: gene Location: 2308-3126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2317-2863 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 17-2863 bp Feature: gene Location: 3314-4390 bp Feature: domain Description: PRK13654 Location: 3347-4385 bp Feature: domain Description: PRK13 654 Location: 3 3 47-43 85 bp Feature: gene Location: 4511-5215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT entF (PRK10252), RVT-Retrons, PRK13654 (magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional)

Seq: NRQW01000512.1 Fischerella muscicola CCMEE 5323 NODE_786_length_9539_cov_35.098858, whole genome shotgun sequence (9593 bp)
Overview 1 RT 1: 158-4545 bp Neighborhood of RT #1 [158, 4568] Acetyltransf_1 RVT-DGRs Avd_like COG4249 YfmG Feature: gene Location: 158-670 bp Feature: domain Description: Acetyltransf_1 Location: 266-578 bp Feature: domain Description: Acetyltransf_1 Location: 266-578 bp Feature: gene Location: 763-1137 bp Feature: gene Location: 1076-2134 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1283-1928 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1283-1928 bp Feature: gene Location: 2136-2477 bp Feature: domain Description: Avd_like Location: 2154-2460 bp Feature: domain Description: Avd_like Location: 2154 -24 60 bp Feature: gene Location: 2670-4568 bp Feature: domain Description: COG4249 Location: 2676-3540 bp Feature: domain Description: COG4 24 9 Location: 2676-354 0 bp Feature: domain Description: YfmG Location: 3708-4545 bp Feature: domain Description: YfmG Location: 3708-4 54 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-DGRs, Avd_like (cd16376), COG4249 (Uncharacterized protein, contains caspase domain ), YfmG (COG1262)