myRT

myRT report for GCA_002870745.1_ASM287074v1

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Seq: NMQJ01000050.1 Fischerella thermalis CCMEE 5205 NODE_62_length_28861_cov_48.323101, whole genome shotgun sequence (28903 bp)
Overview 1 RT 1: 623-5239 bp Neighborhood of RT #1 [623, 5274] ycf46 RVT-GII GIIM McrA InsQ Feature: gene Location: 623-2254 bp Feature: domain Description: ycf46 Location: 980-2033 bp Feature: domain Description: ycf46 Location: 980-2033 bp Feature: gene Location: 2732-2884 bp Feature: gene Location: 3026-4018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3035-3341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3035-3341 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3653 bp Feature: domain Description: GIIM Note: maturase Location: 3428-3653 bp Feature: domain Description: McrA Location: 3716-4010 bp Feature: domain Description: McrA Location: 371 6-401 0 bp Feature: gene Location: 4141-4659 bp Feature: gene Location: 4726-5274 bp Feature: domain Description: InsQ Location: 4732-5239 bp Feature: domain Description: InsQ Location: 4732-5239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ycf46 (CHL00195), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: NMQJ01000453.1 Fischerella thermalis CCMEE 5205 NODE_844_length_4457_cov_26.340139, whole genome shotgun sequence (4499 bp)
Overview 1 RT 1: 20-4301 bp Neighborhood of RT #1 [20, 4447] Cas_Cas1 RVT-CRISPR cas1 DUF4384 Feature: gene Location: 20-517 bp Feature: domain Description: Cas_Cas1 Location: 32-491 bp Feature: domain Description: Cas_Cas1 Location: 32 -491 bp Feature: gene Location: 591-815 bp Feature: gene Location: 1324-3342 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1513-2119 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1513-2 119 bp Feature: domain Description: cas1 Location: 2335-3313 bp Feature: domain Description: cas1 Location: 2 335-3313 bp Feature: gene Location: 3692-4447 bp Feature: domain Description: DUF4384 Location: 4070-4301 bp Feature: domain Description: DUF4384 Location: 4070-4301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), RVT-CRISPR, cas1 (TIGR00287), DUF4384 (pfam14326)