myRT

myRT report for GCA_002871465.1_ASM287146v1

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Seq: PNGA01000014.1 Bacillus sp. UMB0899 ERR1203650.17957_1_62.14, whole genome shotgun sequence (120691 bp)
Overview 1 RT 1: 26504-34151 bp Neighborhood of RT #1 [26504, 34151] DinG DinG RVT-GII GIIM RVT-GII GIIM RVT-GII Feature: gene Location: 26504-26638 bp Feature: gene Location: 26836-29331 bp Feature: domain Description: DinG Location: 26911-27598 bp Feature: domain Description: DinG Location: 2691 1 -27598 bp Feature: domain Description: DinG Location: 27682-28699 bp Feature: domain Description: DinG Location: 27682-28699 bp Feature: gene Location: 29510-30073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29516-29615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951 6-2961 5 bp Feature: domain Description: GIIM Note: maturase Location: 29675-29885 bp Feature: domain Description: GIIM Note: maturase Location: 29675-29885 bp Feature: gene Location: 30170-31432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30374-31031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30374-31 031 bp Feature: domain Description: GIIM Note: maturase Location: 31112-31340 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 1 2-31 340 bp Feature: gene Location: 31955-32650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32156-32630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 56-32630 bp Feature: gene Location: 33193-33444 bp Feature: gene Location: 33528-34151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinG (COG1199), RVT-GII, GIIM (pfam08388)

Seq: PNGA01000008.1 Bacillus sp. UMB0899 ERR1203650.17957_1_62.8, whole genome shotgun sequence (234349 bp)
Overview 1 RT 1: 187041-194009 bp Neighborhood of RT #1 [187041, 194053] Sortilin-Vps10 DUF1541 DUF1541 RVT-GII COG3544 DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 187041-187958 bp Feature: domain Description: Sortilin-Vps10 Location: 187368-187755 bp Feature: domain Description: Sortilin-Vps10 Location: 187368-187755 bp Feature: gene Location: 188016-188630 bp Feature: domain Description: DUF1541 Location: 188262-188415 bp Feature: domain Description: DUF1541 Location: 1882 62 -188415 bp Feature: domain Description: DUF1541 Location: 188454-188607 bp Feature: domain Description: DUF1541 Location: 188454-188607 bp Feature: gene Location: 189548-189928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189554-189914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189554-189914 bp Feature: gene Location: 190768-190995 bp Feature: domain Description: COG3544 Location: 190810-190984 bp Feature: domain Description: COG3544 Location: 190810-190984 bp Feature: gene Location: 191108-194053 bp Feature: domain Description: DUF4158 Location: 191120-191567 bp Feature: domain Description: DUF4158 Location: 19112 0-191567 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 192839-194009 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 192 839-194009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sortilin-Vps10 (pfam15902), DUF1541 (pfam07563), RVT-GII, COG3544 (Uncharacterized conserved protein, DUF305 family ), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526)