myRT

myRT report for GCA_002871495.1_ASM287149v1

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Seq: PNGD01000007.1 Streptococcus sp. UMB0029 ERR1203613.17957_1_25.7, whole genome shotgun sequence (137514 bp)
Overview 1 RT 1: 506-2816 bp Neighborhood of RT #1 [506, 2914] RVT-GII GIIM INT_ICEBs1_C_like DDE_3 Feature: gene Location: 506-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710-1325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 0-1 325 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1592 bp Feature: domain Description: GIIM Note: maturase Location: 1 379-1 592 bp Feature: gene Location: 1884-2417 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1893-2358 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 893-2358 bp Feature: gene Location: 2414-2914 bp Feature: domain Description: DDE_3 Location: 2456-2816 bp Feature: domain Description: DDE_3 Location: 2456-281 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189), DDE_3 (pfam13358)

Seq: PNGD01000009.1 Streptococcus sp. UMB0029 ERR1203613.17957_1_25.9, whole genome shotgun sequence (125000 bp)
Overview 1 RT 1: 83793-90474 bp Neighborhood of RT #1 [83793, 90476] RimL purH RVT-UG3 RVT-UG8 purH Feature: gene Location: 83793-84257 bp Feature: domain Description: RimL Location: 83916-84222 bp Feature: domain Description: RimL Location: 83916-842 2 2 bp Feature: gene Location: 84259-85806 bp Feature: domain Description: purH Location: 84262-85804 bp Feature: domain Description: purH Location: 842 62 -85804 bp Feature: gene Location: 86063-87367 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 86333-86786 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 86333-86786 bp Feature: gene Location: 87471-89477 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 87993-88434 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 87993-88434 bp Feature: gene Location: 89656-89817 bp Feature: gene Location: 90339-90476 bp Feature: domain Description: purH Location: 90345-90474 bp Feature: domain Description: purH Location: 90345-90474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), purH (TIGR00355), RVT-UG3, RVT-UG8