myRT

myRT report for GCA_002871515.1_ASM287151v1

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Seq: PNGI01000049.1 Prevotella timonensis strain UMB0818 ERR1203673.17957_1_85.49, whole genome shotgun sequence (8151 bp)
Overview 1 RT 1: 3141-7653 bp Neighborhood of RT #1 [3141, 7958] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII GIIM Relaxase Feature: gene Location: 3141-4085 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3174-3432 bp Feature: domain Description: Arm-DNA-bind_5 Location: 31 74-3432 bp Feature: domain Description: Phage_int_SAM_5 Location: 3468-3765 bp Feature: domain Description: Phage_int_SAM_5 Location: 3468-3765 bp Feature: domain Description: INTN1_C_like Location: 3837-4071 bp Feature: domain Description: INTN1 _C_like Location: 3837-4071 bp Feature: gene Location: 4320-4469 bp Feature: gene Location: 5000-6406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5342-5960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5342-5960 bp Feature: domain Description: GIIM Note: maturase Location: 6014-6218 bp Feature: domain Description: GIIM Note: maturase Location: 601 4-621 8 bp Feature: gene Location: 6492-7163 bp Feature: gene Location: 7185-7958 bp Feature: domain Description: Relaxase Location: 7203-7653 bp Feature: domain Description: Relaxase Location: 7203-7653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, GIIM (pfam08388), Relaxase (pfam03432)

Seq: PNGI01000059.1 Prevotella timonensis strain UMB0818 ERR1203673.17957_1_85.59, whole genome shotgun sequence (2476 bp)
Overview 1 RT 1: 96-1958 bp Neighborhood of RT #1 [96, 2353] RVT_N RVT-GII GIIM Feature: gene Location: 96-263 bp Feature: gene Location: 677-2353 bp Feature: RT Description: RVT_N Location: 737-980 bp Feature: RT Description: RVT_N Location: 737-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025-1673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 5-1673 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1958 bp Feature: domain Description: GIIM Note: maturase Location: 172 7-1958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)