myRT

myRT report for GCA_002871915.1_ASM287191v1

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Seq: PNHR01000018.1 Aerococcus urinae strain UMB0080 ERR1203590.17957_1_2.18, whole genome shotgun sequence (34300 bp)
Overview 1 RT 1: 1-4725 bp Neighborhood of RT #1 [1, 4802] RVT-GII GIIM PepN GlpR Feature: gene Location: 1-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-403 bp Feature: domain Description: GIIM Note: maturase Location: 463-661 bp Feature: domain Description: GIIM Note: maturase Location: 463-661 bp Feature: gene Location: 967-3498 bp Feature: domain Description: PepN Location: 985-3457 bp Feature: domain Description: PepN Location: 985-3457 bp Feature: gene Location: 4026-4802 bp Feature: domain Description: GlpR Location: 4029-4725 bp Feature: domain Description: GlpR Location: 4029-4725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PepN (COG0308), GlpR (COG1349)

Seq: PNHR01000019.1 Aerococcus urinae strain UMB0080 ERR1203590.17957_1_2.19, whole genome shotgun sequence (32665 bp)
Overview 1 RT 1: 5945-11475 bp Neighborhood of RT #1 [5945, 11486] GT4_PimA-like RfbX RVT-AbiK PRK15057 Feature: gene Location: 5945-7123 bp Feature: domain Description: GT4_PimA-like Location: 5951-6848 bp Feature: domain Description: GT4_PimA-like Location: 5951-6848 bp Feature: gene Location: 7116-8354 bp Feature: domain Description: RfbX Location: 7197-8328 bp Feature: domain Description: RfbX Location: 7197-832 8 bp Feature: gene Location: 8451-9284 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 8910-9276 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 8910-92 76 bp Feature: gene Location: 9308-10255 bp Feature: gene Location: 10299-11486 bp Feature: domain Description: PRK15057 Location: 10323-11475 bp Feature: domain Description: PRK15057 Location: 1032 3-11475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), RfbX (COG2244), RVT-AbiK, PRK15057 (UDP-glucose 6-dehydrogenase; Provisional)

Seq: PNHR01000002.1 Aerococcus urinae strain UMB0080 ERR1203590.17957_1_2.2, whole genome shotgun sequence (169177 bp)
Overview 1 RT 1: 147264-151347 bp Neighborhood of RT #1 [147264, 151415] Maff2 RVT-GII HNHc Maff2 SSB_OBF Feature: gene Location: 147264-148127 bp Feature: gene Location: 148138-148284 bp Feature: domain Description: Maff2 Location: 148189-148273 bp Feature: domain Description: Maff2 Location: 148189-148273 bp Feature: gene Location: 148388-150256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148715-149453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148715-149453 bp Feature: domain Description: HNHc Note: nucleases Location: 149984-150146 bp Feature: domain Description: HNHc Note: nucleases Location: 149984-150146 bp Feature: gene Location: 150971-151102 bp Feature: domain Description: Maff2 Location: 150974-151100 bp Feature: domain Description: Maff2 Location: 150974-151100 bp Feature: gene Location: 151104-151415 bp Feature: domain Description: SSB_OBF Location: 151128-151347 bp Feature: domain Description: SSB_OBF Location: 151128-1513 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507), SSB_OBF (cd04496)

Seq: PNHR01000038.1 Aerococcus urinae strain UMB0080 ERR1203590.17957_1_2.38, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 402-1611 bp Neighborhood of RT #1 [402, 1808] RVT-GII GIIM Feature: gene Location: 402-1808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1353 bp Feature: domain Description: GIIM Note: maturase Location: 1413-1611 bp Feature: domain Description: GIIM Note: maturase Location: 14 13-1611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)