myRT

myRT report for GCA_002872535.1_ASM287253v1

Download annotations/find similar RTs

Seq: MCSB01000013.1 Vibrio lentus strain 10N.286.55.E1 10N.286.55.E1_contig_2, whole genome shotgun sequence (662933 bp)
Overview 1 RT 1: 207852-218496 bp Neighborhood of RT #1 [207852, 218501] AE_Prim_S_like RVT-UG10 pheT pheS Feature: gene Location: 207852-208778 bp Feature: gene Location: 209059-209421 bp Feature: gene Location: 209542-214869 bp Feature: domain Description: AE_Prim_S_like Location: 209617-209932 bp Feature: domain Description: AE_Prim_S_like Location: 20961 7-209932 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 210874-211534 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 21 0874-21 1 534 bp Feature: gene Location: 215019-217406 bp Feature: domain Description: pheT Location: 215022-217404 bp Feature: domain Description: pheT Location: 21 5022-21 7404 bp Feature: gene Location: 217425-218501 bp Feature: domain Description: pheS Location: 217518-218496 bp Feature: domain Description: pheS Location: 21 751 8-21 8496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, pheT (PRK09616), pheS (TIGR00468)

Seq: MCSB01000019.1 Vibrio lentus strain 10N.286.55.E1 10N.286.55.E1_contig_25, whole genome shotgun sequence (55153 bp)
Overview 1 RT 1: 26530-31990 bp Neighborhood of RT #1 [26530, 32001] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 26530-29124 bp Feature: domain Description: Big_1 Location: 28111-28240 bp Feature: domain Description: Big_1 Location: 2 8111-2 82 40 bp Feature: domain Description: Big_1 Location: 28348-28531 bp Feature: domain Description: Big_1 Location: 2 8348-2 8531 bp Feature: domain Description: DUF1566 Location: 28858-29113 bp Feature: domain Description: DUF1566 Location: 2 8858-2 9113 bp Feature: gene Location: 29213-29704 bp Feature: gene Location: 30066-31322 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30273-30975 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302 73-30975 bp Feature: gene Location: 31302-31676 bp Feature: domain Description: Avd_like Location: 31332-31662 bp Feature: domain Description: Avd_like Location: 31332 -31662 bp Feature: gene Location: 31708-32001 bp Feature: domain Description: trans_reg_C Location: 31771-31990 bp Feature: domain Description: trans_reg_C Location: 31771-31990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)