myRT

myRT report for GCA_002872925.1_ASM287292v1

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Seq: MCVW01000003.1 Vibrio lentus strain 10N.286.46.A11 10N.286.46.A11_contig_10, whole genome shotgun sequence (6122 bp)
Overview 1 RT 1: 133-3860 bp Neighborhood of RT #1 [133, 3862] RVT_N RVT-GII GIIM QueF Feature: gene Location: 133-447 bp Feature: gene Location: 826-2457 bp Feature: domain Description: RVT_N Location: 1033-1276 bp Feature: domain Description: RVT_N Location: 1 033-1 276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 321 -1 948 bp Feature: domain Description: GIIM Note: maturase Location: 2008-2233 bp Feature: domain Description: GIIM Note: maturase Location: 2008-2233 bp Feature: gene Location: 2847-2993 bp Feature: gene Location: 3044-3862 bp Feature: domain Description: QueF Location: 3056-3860 bp Feature: domain Description: QueF Location: 3056-3860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueF (TIGR03138)

Seq: MCVW01000235.1 Vibrio lentus strain 10N.286.46.A11 10N.286.46.A11_contig_59, whole genome shotgun sequence (47279 bp)
Overview 1 RT 1: 16821-27176 bp Neighborhood of RT #1 [16821, 27193] TniQ RVT-UG1 nitrilase_Rim1_like DUF4145 HsdR RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 16821-18032 bp Feature: domain Description: TniQ Location: 16836-17289 bp Feature: domain Description: TniQ Location: 16836-172 89 bp Feature: gene Location: 18140-18586 bp Feature: gene Location: 18595-22284 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 19207-19717 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 192 07-19717 bp Feature: domain Description: nitrilase_Rim1_like Location: 21649-21955 bp Feature: domain Description: nitrilase_Rim1_like Location: 2 1649-2 1955 bp Feature: gene Location: 22296-25931 bp Feature: domain Description: DUF4145 Location: 22413-22692 bp Feature: domain Description: DUF4145 Location: 2 2 413-2 2 692 bp Feature: domain Description: HsdR Location: 23028-25854 bp Feature: domain Description: HsdR Location: 2 302 8-2 5854 bp Feature: gene Location: 25970-27193 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 25997-26555 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 2 5997-2 6555 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 26585-27176 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 2 6585-2 7176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TniQ (pfam06527), RVT-UG1, nitrilase_Rim1_like (cd07574), DUF4145 (pfam13643), HsdR (COG4096), RMtype1_S_SonII-TRD2-CR2_like (cd17246)

Seq: MCVW01000269.1 Vibrio lentus strain 10N.286.46.A11 10N.286.46.A11_contig_9, whole genome shotgun sequence (2163 bp)
Overview 1 RT 1: 420-1827 bp Neighborhood of RT #1 [420, 2051] RVT_N RVT-GII GIIM Feature: gene Location: 420-2051 bp Feature: domain Description: RVT_N Location: 627-870 bp Feature: domain Description: RVT_N Location: 627-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1542 bp Feature: domain Description: GIIM Note: maturase Location: 1602-1827 bp Feature: domain Description: GIIM Note: maturase Location: 1602-1827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)