myRT

myRT report for GCA_002872955.1_ASM287295v1

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Seq: MCVU01000360.1 Vibrio lentus strain 10N.286.46.B11 10N.286.46.B11_contig_196, whole genome shotgun sequence (29462 bp)
Overview 1 RT 1: 25651-29048 bp Neighborhood of RT #1 [25651, 29048] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 25651-26295 bp Feature: domain Description: TIGR02646 Location: 25747-26119 bp Feature: domain Description: TIGR02646 Location: 25747-261 1 9 bp Feature: gene Location: 26288-27931 bp Feature: domain Description: COG3950 Location: 26477-27770 bp Feature: domain Description: COG3950 Location: 26477-27770 bp Feature: gene Location: 27924-28871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28032-28629 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28032-28629 bp Feature: gene Location: 28863-29048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: MCVU01000642.1 Vibrio lentus strain 10N.286.46.B11 10N.286.46.B11_contig_45, whole genome shotgun sequence (1812 bp)
Overview 1 RT 1: 69-1476 bp Neighborhood of RT #1 [69, 1700] RVT_N RVT-GII GIIM Feature: gene Location: 69-1700 bp Feature: RT Description: RVT_N Location: 276-519 bp Feature: RT Description: RVT_N Location: 2 76-519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564-1191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564-1191 bp Feature: domain Description: GIIM Note: maturase Location: 1251-1476 bp Feature: domain Description: GIIM Note: maturase Location: 12 51-1476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCVU01000935.1 Vibrio lentus strain 10N.286.46.B11 10N.286.46.B11_contig_713, whole genome shotgun sequence (2145 bp)
Overview 1 RT 1: 3-1839 bp Neighborhood of RT #1 [3, 2063] RVT_N RVT-GII GIIM Feature: gene Location: 3-224 bp Feature: gene Location: 432-2063 bp Feature: RT Description: RVT_N Location: 639-882 bp Feature: RT Description: RVT_N Location: 63 9-882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-1554 bp Feature: domain Description: GIIM Note: maturase Location: 1614-1839 bp Feature: domain Description: GIIM Note: maturase Location: 1614-183 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)