myRT

myRT report for GCA_002873265.1_ASM287326v1

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Seq: MCUZ01000009.1 Vibrio lentus strain 10N.286.49.A12 10N.286.49.A12_contig_16, whole genome shotgun sequence (55153 bp)
Overview 1 RT 1: 23153-28613 bp Neighborhood of RT #1 [23153, 28624] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 23153-23446 bp Feature: domain Description: trans_reg_C Location: 23216-23435 bp Feature: domain Description: trans_reg_C Location: 2321 6-23435 bp Feature: gene Location: 23478-23852 bp Feature: domain Description: Avd_like Location: 23508-23838 bp Feature: domain Description: Avd_like Location: 23508-23838 bp Feature: gene Location: 23832-25088 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24039-24741 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24039-24741 bp Feature: gene Location: 25450-25941 bp Feature: gene Location: 26030-28624 bp Feature: domain Description: Big_1 Location: 27611-27740 bp Feature: domain Description: Big_1 Location: 2761 1 -27740 bp Feature: domain Description: Big_1 Location: 27848-28031 bp Feature: domain Description: Big_1 Location: 27848-28031 bp Feature: domain Description: DUF1566 Location: 28358-28613 bp Feature: domain Description: DUF1 566 Location: 28358-2861 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), Avd_like (cd16376), RVT-DGRs, Big_1 (pfam02369), DUF1566 (pfam07603)

Seq: MCUZ01000029.1 Vibrio lentus strain 10N.286.49.A12 10N.286.49.A12_contig_34, whole genome shotgun sequence (37365 bp)
Overview 1 RT 1: 13851-19033 bp Neighborhood of RT #1 [13851, 19033] groEL RVT_N RVT-GII GIIM HNHc Feature: gene Location: 13851-15497 bp Feature: domain Description: groEL Location: 13857-15477 bp Feature: domain Description: groEL Location: 13857-15477 bp Feature: gene Location: 16226-16405 bp Feature: gene Location: 16592-18283 bp Feature: RT Description: RVT_N Location: 16664-16907 bp Feature: RT Description: RVT_N Location: 16664-16907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16952-17597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16952 -17597 bp Feature: domain Description: GIIM Note: maturase Location: 17648-17882 bp Feature: domain Description: GIIM Note: maturase Location: 17648-17882 bp Feature: domain Description: HNHc Note: nucleases Location: 18098-18260 bp Feature: domain Description: HNHc Note: nucleases Location: 18098-182 60 bp Feature: gene Location: 18340-18642 bp Feature: gene Location: 18860-19033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)