myRT

myRT report for GCA_002873405.1_ASM287340v1

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Seq: MCUQ01000003.1 Vibrio cyclitrophicus strain 10N.286.49.E3 10N.286.49.E3_contig_10, whole genome shotgun sequence (504032 bp)
Overview 1 RT 1: 45877-50832 bp Neighborhood of RT #1 [45877, 50832] COG2984 PRK10060 YhhI RVT-GII GIIM group_II_RT_mat Feature: gene Location: 45877-48657 bp Feature: domain Description: COG2984 Location: 45904-46756 bp Feature: domain Description: COG2984 Location: 45904-46756 bp Feature: domain Description: PRK10060 Location: 47029-48640 bp Feature: domain Description: PRK1 0060 Location: 47029-48640 bp Feature: gene Location: 48886-49098 bp Feature: domain Description: YhhI Location: 48892-49018 bp Feature: domain Description: YhhI Location: 48892-4901 8 bp Feature: gene Location: 49181-50185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49187-49796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 87-49796 bp Feature: domain Description: GIIM Note: maturase Location: 49877-50099 bp Feature: domain Description: GIIM Note: maturase Location: 49877-50099 bp Feature: gene Location: 50178-50408 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 50214-50403 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5021 4-50403 bp Feature: gene Location: 50677-50832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2984 (ABC-type uncharacterized transport system, periplasmic component ), PRK10060 (cyclic di-GMP phosphodiesterase), YhhI (COG5433), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: MCUQ01000054.1 Vibrio cyclitrophicus strain 10N.286.49.E3 10N.286.49.E3_contig_6, whole genome shotgun sequence (198748 bp)
Overview 1 RT 1: 189157-195387 bp Neighborhood of RT #1 [189157, 195446] PHP_HisPPase 3a0107s01c2 RVT_N RVT-GII GIIM Acetyltransf_1 Feature: gene Location: 189157-191187 bp Feature: domain Description: PHP_HisPPase Location: 189169-189418 bp Feature: domain Description: PHP_HisPPase Location: 189169-189418 bp Feature: domain Description: 3a0107s01c2 Location: 190765-191020 bp Feature: domain Description: 3a0107s01c2 Location: 190765-19102 0 bp Feature: gene Location: 191168-191458 bp Feature: gene Location: 191754-193232 bp Feature: RT Description: RVT_N Location: 191808-192051 bp Feature: RT Description: RVT_N Location: 191808-192 051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192096-192723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 096-192 72 3 bp Feature: domain Description: GIIM Note: maturase Location: 192780-193008 bp Feature: domain Description: GIIM Note: maturase Location: 192 780-193008 bp Feature: gene Location: 193525-193773 bp Feature: gene Location: 194973-195446 bp Feature: domain Description: Acetyltransf_1 Location: 195063-195387 bp Feature: domain Description: Acetyltransf_1 Location: 195063-195387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), 3a0107s01c2 (TIGR00972), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Acetyltransf_1 (pfam00583)