myRT

myRT report for GCA_002873475.1_ASM287347v1

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Seq: MCUL01000001.1 Vibrio lentus strain 10N.286.51.A1 10N.286.51.A1_contig_0, whole genome shotgun sequence (577057 bp)
Overview 1 RT 1: 452964-457481 bp Neighborhood of RT #1 [452964, 457486] RVT-UG4 PDC1_MCP_like Tar Feature: gene Location: 452964-453521 bp Feature: gene Location: 453626-453877 bp Feature: gene Location: 454019-454969 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 454367-454826 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 454367-454826 bp Feature: gene Location: 455049-455249 bp Feature: gene Location: 455399-457486 bp Feature: domain Description: PDC1_MCP_like Location: 455609-456089 bp Feature: domain Description: PDC1 _MCP_like Location: 455609-456089 bp Feature: domain Description: Tar Location: 456323-457481 bp Feature: domain Description: Tar Location: 456323-457481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PDC1_MCP_like (cd12913), Tar (COG0840)

Seq: MCUL01000024.1 Vibrio lentus strain 10N.286.51.A1 10N.286.51.A1_contig_3, whole genome shotgun sequence (875401 bp)
Overview 1 RT 1: 699733-703941 bp Neighborhood of RT #1 [699733, 703949] COG2932 rpoP RVT-UG16 HEPN_RiboL-PSP Feature: gene Location: 699733-700377 bp Feature: domain Description: COG2932 Location: 699961-700351 bp Feature: domain Description: COG2 932 Location: 699961-700351 bp Feature: gene Location: 700681-701040 bp Feature: domain Description: rpoP Location: 700723-700798 bp Feature: domain Description: rpoP Location: 70072 3-700798 bp Feature: gene Location: 701121-702596 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 701490-701892 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 701490-701892 bp Feature: gene Location: 702728-703288 bp Feature: gene Location: 703416-703949 bp Feature: domain Description: HEPN_RiboL-PSP Location: 703461-703941 bp Feature: domain Description: HEPN_RiboL-PSP Location: 703461-703941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), rpoP (PRK00398), RVT-UG16, HEPN_RiboL-PSP (pfam18735)

Seq: MCUL01000057.1 Vibrio lentus strain 10N.286.51.A1 10N.286.51.A1_contig_7, whole genome shotgun sequence (149910 bp)
Overview 1 RT 1: 121290-126747 bp Neighborhood of RT #1 [121290, 126758] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 121290-123881 bp Feature: domain Description: Big_1 Location: 122871-123000 bp Feature: domain Description: Big_1 Location: 122871-123 000 bp Feature: domain Description: Big_1 Location: 123108-123291 bp Feature: domain Description: Big_1 Location: 123 108-123 291 bp Feature: domain Description: DUF1566 Location: 123618-123870 bp Feature: domain Description: DUF1566 Location: 123 618-123 870 bp Feature: gene Location: 123970-124461 bp Feature: gene Location: 124823-126079 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125030-125732 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12503 0-12573 2 bp Feature: gene Location: 126059-126433 bp Feature: domain Description: Avd_like Location: 126089-126419 bp Feature: domain Description: Avd_like Location: 126089-126419 bp Feature: gene Location: 126465-126758 bp Feature: domain Description: trans_reg_C Location: 126528-126747 bp Feature: domain Description: trans_reg_C Location: 126528-126747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)