myRT

myRT report for GCA_002873515.1_ASM287351v1

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Seq: MCUH01000006.1 Vibrio cyclitrophicus strain 10N.286.51.B1 10N.286.51.B1_contig_13, whole genome shotgun sequence (564421 bp)
Overview 1 RT 1: 33134-37721 bp Neighborhood of RT #1 [33134, 37721] RVT_N RVT-GII GIIM Abi_C Feature: gene Location: 33134-33520 bp Feature: gene Location: 33818-34000 bp Feature: gene Location: 34023-35654 bp Feature: RT Description: RVT_N Location: 34230-34473 bp Feature: RT Description: RVT_N Location: 34230-34473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34518-35145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451 8-351 45 bp Feature: domain Description: GIIM Note: maturase Location: 35205-35430 bp Feature: domain Description: GIIM Note: maturase Location: 35205-35430 bp Feature: gene Location: 36266-37114 bp Feature: domain Description: Abi_C Location: 36854-37076 bp Feature: domain Description: Abi_C Location: 36854-37076 bp Feature: gene Location: 37242-37721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Abi_C (pfam14355)

Seq: MCUH01000023.1 Vibrio cyclitrophicus strain 10N.286.51.B1 10N.286.51.B1_contig_29, whole genome shotgun sequence (49685 bp)
Overview 1 RT 1: 18011-24864 bp Neighborhood of RT #1 [18011, 25310] RVT-Retrons Smc Smc Smc Feature: gene Location: 18011-18946 bp Feature: gene Location: 18982-20082 bp Feature: gene Location: 20818-21966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21040-21688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 1040-2 1688 bp Feature: gene Location: 22224-23408 bp Feature: gene Location: 23421-25310 bp Feature: domain Description: Smc Location: 23490-23580 bp Feature: domain Description: Smc Location: 2 3490-2 3580 bp Feature: domain Description: Smc Location: 24006-24378 bp Feature: domain Description: Smc Location: 2 4006-2 4378 bp Feature: domain Description: Smc Location: 24519-24864 bp Feature: domain Description: Smc Location: 2 4519-2 4864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Smc (COG1196)