myRT

myRT report for GCA_002873635.1_ASM287363v1

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Seq: MCTY01000035.1 Shewanella sp. 10N.286.52.B9 10N.286.52.B9_contig_129, whole genome shotgun sequence (4224 bp)
Overview 1 RT 1: 38-2406 bp Neighborhood of RT #1 [38, 2420] RVT-GII GIIM RimL Feature: gene Location: 38-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-938 bp Feature: domain Description: GIIM Note: maturase Location: 986-1190 bp Feature: domain Description: GIIM Note: maturase Location: 986-1 1 90 bp Feature: gene Location: 1481-1843 bp Feature: gene Location: 1866-2420 bp Feature: domain Description: RimL Location: 1875-2406 bp Feature: domain Description: RimL Location: 1 875-2406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, GIIM (pfam08388)

Seq: MCTY01000182.1 Shewanella sp. 10N.286.52.B9 10N.286.52.B9_contig_48, whole genome shotgun sequence (22982 bp)
Overview 1 RT 1: 19127-22797 bp Neighborhood of RT #1 [19127, 22797] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 19127-19429 bp Feature: domain Description: InsE Location: 19139-19427 bp Feature: domain Description: InsE Location: 19139-1942 7 bp Feature: gene Location: 19366-19848 bp Feature: domain Description: PHA02517 Location: 19552-19825 bp Feature: domain Description: PHA02 517 Location: 19552 -1982 5 bp Feature: gene Location: 20489-22012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20762-21494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0762 -2 1494 bp Feature: domain Description: GIIM Note: maturase Location: 21566-21767 bp Feature: domain Description: GIIM Note: maturase Location: 2 1566-2 1767 bp Feature: gene Location: 22141-22461 bp Feature: domain Description: PHA02517 Location: 22144-22411 bp Feature: domain Description: PHA02 517 Location: 2 2 144-2 2 411 bp Feature: gene Location: 22609-22797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)