myRT

myRT report for GCA_002873815.1_ASM287381v1

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Seq: MCTE01000153.1 Vibrio cyclitrophicus strain 10N.286.54.E11 10N.286.54.E11_contig_83, whole genome shotgun sequence (7102 bp)
Overview 1 RT 1: 310-6962 bp Neighborhood of RT #1 [310, 7003] TPR TPR_8 TPR_8 TPR RVT_N RVT-GII GIIM Mrr_cat zf-C4_Topoisom PRK09776 GGDEF EAL Feature: gene Location: 310-1431 bp Feature: domain Description: TPR Location: 556-832 bp Feature: domain Description: TPR Location: 556-832 bp Feature: domain Description: TPR_8 Location: 859-943 bp Feature: domain Description: TPR_8 Location: 859-943 bp Feature: domain Description: TPR_8 Location: 955-1045 bp Feature: domain Description: TPR_8 Location: 955-1 045 bp Feature: domain Description: TPR Location: 1063-1339 bp Feature: domain Description: TPR Location: 1 063-1 339 bp Feature: gene Location: 1601-1753 bp Feature: gene Location: 1772-3403 bp Feature: RT Description: RVT_N Location: 1979-2222 bp Feature: RT Description: RVT_N Location: 1 979-2222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2267-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2267-2894 bp Feature: domain Description: GIIM Note: maturase Location: 2954-3179 bp Feature: domain Description: GIIM Note: maturase Location: 2954-31 79 bp Feature: gene Location: 3912-4733 bp Feature: domain Description: Mrr_cat Location: 4212-4539 bp Feature: domain Description: Mrr_cat Location: 421 2-4539 bp Feature: domain Description: zf-C4_Topoisom Location: 4614-4725 bp Feature: domain Description: zf-C4_Topoisom Location: 461 4-4725 bp Feature: gene Location: 5351-7003 bp Feature: domain Description: PRK09776 Location: 5414-5741 bp Feature: domain Description: PRK09776 Location: 541 4-5741 bp Feature: domain Description: GGDEF Location: 5747-6188 bp Feature: domain Description: GGDEF Location: 5747-61 88 bp Feature: domain Description: EAL Location: 6254-6962 bp Feature: domain Description: EAL Location: 6254-6962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TPR (smart00028), TPR_8 (pfam13181), PRK09776 (putative diguanylate cyclase; Provisional), GGDEF (TIGR00254), EAL (smart00052)