myRT

myRT report for GCA_002873895.1_ASM287389v1

Download annotations/find similar RTs

Seq: MCSZ01000029.1 Vibrio lentus strain 10N.286.54.E7 10N.286.54.E7_contig_34, whole genome shotgun sequence (55379 bp)
Overview 1 RT 1: 26756-32216 bp Neighborhood of RT #1 [26756, 32227] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 26756-29350 bp Feature: domain Description: Big_1 Location: 28337-28466 bp Feature: domain Description: Big_1 Location: 28337-28466 bp Feature: domain Description: Big_1 Location: 28574-28757 bp Feature: domain Description: Big_1 Location: 28574-28757 bp Feature: domain Description: DUF1566 Location: 29084-29339 bp Feature: domain Description: DUF1 566 Location: 29084-29339 bp Feature: gene Location: 29439-29930 bp Feature: gene Location: 30292-31548 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30499-31201 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30499-31 201 bp Feature: gene Location: 31528-31902 bp Feature: domain Description: Avd_like Location: 31558-31888 bp Feature: domain Description: Avd_like Location: 31 558-31 888 bp Feature: gene Location: 31934-32227 bp Feature: domain Description: trans_reg_C Location: 31997-32216 bp Feature: domain Description: trans_reg_C Location: 31 997-3221 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)

Seq: MCSZ01000031.1 Vibrio lentus strain 10N.286.54.E7 10N.286.54.E7_contig_36, whole genome shotgun sequence (77540 bp)
Overview 1 RT 1: 57561-68205 bp Neighborhood of RT #1 [57561, 68210] AE_Prim_S_like RVT-UG10 pheT pheS Feature: gene Location: 57561-58487 bp Feature: gene Location: 58768-59130 bp Feature: gene Location: 59251-64578 bp Feature: domain Description: AE_Prim_S_like Location: 59326-59641 bp Feature: domain Description: AE_Prim_S_like Location: 5932 6-59641 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 60583-61243 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 60583-612 43 bp Feature: gene Location: 64728-67115 bp Feature: domain Description: pheT Location: 64731-67113 bp Feature: domain Description: pheT Location: 64731-67113 bp Feature: gene Location: 67134-68210 bp Feature: domain Description: pheS Location: 67227-68205 bp Feature: domain Description: pheS Location: 672 2 7-682 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, pheT (PRK09616), pheS (TIGR00468)