myRT

myRT report for GCA_002874435.1_ASM287443v1

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Seq: MCUS01000003.1 Vibrio lentus strain 10N.286.49.C5 10N.286.49.C5_contig_10, whole genome shotgun sequence (314440 bp)
Overview 1 RT 1: 292513-297701 bp Neighborhood of RT #1 [292513, 297769] TIGR02646 COG3950 RVT-Retrons YcgN CxxCxxCC Feature: gene Location: 292513-293172 bp Feature: domain Description: TIGR02646 Location: 292582-293011 bp Feature: domain Description: TIGR02646 Location: 292582-29301 1 bp Feature: gene Location: 293172-294791 bp Feature: domain Description: COG3950 Location: 293361-294702 bp Feature: domain Description: COG3950 Location: 293361 -294702 bp Feature: gene Location: 294778-295716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 294880-295471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 294880-295471 bp Feature: gene Location: 296915-297361 bp Feature: domain Description: YcgN Location: 296921-297338 bp Feature: domain Description: YcgN Location: 296921 -297338 bp Feature: gene Location: 297341-297769 bp Feature: domain Description: CxxCxxCC Location: 297527-297701 bp Feature: domain Description: CxxCxxCC Location: 297527-297701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, YcgN (COG2983), CxxCxxCC (pfam03692)

Seq: MCUS01000013.1 Vibrio lentus strain 10N.286.49.C5 10N.286.49.C5_contig_2, whole genome shotgun sequence (884504 bp)
Overview 1 RT 1: 453266-459671 bp Neighborhood of RT #1 [453266, 459691] pheT RVT-UG25 MhpC Feature: gene Location: 453266-455653 bp Feature: domain Description: pheT Location: 453269-455651 bp Feature: domain Description: pheT Location: 4532 69-455651 bp Feature: gene Location: 455827-456603 bp Feature: gene Location: 456600-457550 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 457017-457416 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 457017-457416 bp Feature: gene Location: 457553-458500 bp Feature: gene Location: 458819-459691 bp Feature: domain Description: MhpC Location: 458924-459671 bp Feature: domain Description: MhpC Location: 45892 4-459671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pheT (PRK09616), RVT-UG25, MhpC (COG0596)

Seq: MCUS01000018.1 Vibrio lentus strain 10N.286.49.C5 10N.286.49.C5_contig_24, whole genome shotgun sequence (132553 bp)
Overview 1 RT 1: 103933-109390 bp Neighborhood of RT #1 [103933, 109401] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 103933-106524 bp Feature: domain Description: Big_1 Location: 105514-105643 bp Feature: domain Description: Big_1 Location: 105514-105643 bp Feature: domain Description: Big_1 Location: 105751-105934 bp Feature: domain Description: Big_1 Location: 105751-10593 4 bp Feature: domain Description: DUF1566 Location: 106261-106513 bp Feature: domain Description: DUF1566 Location: 106261-106513 bp Feature: gene Location: 106613-107104 bp Feature: gene Location: 107466-108722 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107673-108375 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107673 -1083 75 bp Feature: gene Location: 108702-109076 bp Feature: domain Description: Avd_like Location: 108732-109062 bp Feature: domain Description: Avd_like Location: 10873 2-109062 bp Feature: gene Location: 109108-109401 bp Feature: domain Description: trans_reg_C Location: 109171-109390 bp Feature: domain Description: trans_reg_C Location: 109171-1093 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)

Seq: MCUS01000021.1 Vibrio lentus strain 10N.286.49.C5 10N.286.49.C5_contig_27, whole genome shotgun sequence (122011 bp)
Overview 1 RT 1: 116960-122009 bp Neighborhood of RT #1 [116960, 122009] RVT-UG7 Feature: gene Location: 116960-117418 bp Feature: gene Location: 117774-118445 bp Feature: gene Location: 118579-120123 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 118966-119386 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 118966-119386 bp Feature: gene Location: 120259-121308 bp Feature: gene Location: 121362-122009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7