myRT

myRT report for GCA_002874485.1_ASM287448v1

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Seq: MCUE01000006.1 Vibrio lentus strain 10N.286.51.B9 10N.286.51.B9_contig_13, whole genome shotgun sequence (611834 bp)
Overview 1 RT 1: 444724-450766 bp Neighborhood of RT #1 [444724, 450783] MFS_MefA_like RVT_N RVT-GII GIIM Cas6_I-F Csy3_I-F Feature: gene Location: 444724-445905 bp Feature: domain Description: MFS_MefA_like Location: 444739-445861 bp Feature: domain Description: MFS_MefA_like Location: 444739-445861 bp Feature: gene Location: 446433-446564 bp Feature: gene Location: 447177-448649 bp Feature: RT Description: RVT_N Location: 447225-447468 bp Feature: RT Description: RVT_N Location: 447225-447468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447513-448140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44751 3-4481 40 bp Feature: domain Description: GIIM Note: maturase Location: 448200-448425 bp Feature: domain Description: GIIM Note: maturase Location: 448200-448425 bp Feature: gene Location: 449137-449742 bp Feature: domain Description: Cas6_I-F Location: 449149-449734 bp Feature: domain Description: Cas6_I-F Location: 4491 49-449734 bp Feature: gene Location: 449752-450783 bp Feature: domain Description: Csy3_I-F Location: 449761-450766 bp Feature: domain Description: Csy3_I-F Location: 449761 -450766 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MCUE01000013.1 Vibrio lentus strain 10N.286.51.B9 10N.286.51.B9_contig_2, whole genome shotgun sequence (360495 bp)
Overview 1 RT 1: 93303-99564 bp Neighborhood of RT #1 [93303, 99674] PRK05096 RVT-Retrons GstA TPR YdcF-like Feature: gene Location: 93303-94346 bp Feature: domain Description: PRK05096 Location: 93306-94341 bp Feature: domain Description: PRK05096 Location: 93306-94341 bp Feature: gene Location: 95393-96343 bp Feature: gene Location: 96330-97247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96432-97017 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96432 -97017 bp Feature: gene Location: 97418-98092 bp Feature: domain Description: GstA Location: 97421-98009 bp Feature: domain Description: GstA Location: 9742 1-98009 bp Feature: gene Location: 98577-99674 bp Feature: domain Description: TPR Location: 98823-99036 bp Feature: domain Description: TPR Location: 9882 3-99036 bp Feature: domain Description: YdcF-like Location: 99159-99564 bp Feature: domain Description: YdcF-like Location: 99159-99564 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MCUE01000035.1 Vibrio lentus strain 10N.286.51.B9 10N.286.51.B9_contig_4, whole genome shotgun sequence (135603 bp)
Overview 1 RT 1: 23331-28791 bp Neighborhood of RT #1 [23331, 28802] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 23331-23624 bp Feature: domain Description: trans_reg_C Location: 23394-23613 bp Feature: domain Description: trans_reg_C Location: 23 3 94-23 613 bp Feature: gene Location: 23656-24030 bp Feature: domain Description: Avd_like Location: 23686-24016 bp Feature: domain Description: Avd_like Location: 23 686-24016 bp Feature: gene Location: 24010-25266 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24217-24919 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24217-24919 bp Feature: gene Location: 25628-26119 bp Feature: gene Location: 26208-28802 bp Feature: domain Description: Big_1 Location: 27789-27918 bp Feature: domain Description: Big_1 Location: 27789-27918 bp Feature: domain Description: Big_1 Location: 28026-28209 bp Feature: domain Description: Big_1 Location: 28026-28209 bp Feature: domain Description: DUF1566 Location: 28536-28791 bp Feature: domain Description: DUF1566 Location: 2853 6-28791 bp Sorry, your browser does not support inline SVG.
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