myRT

myRT report for GCA_002874865.1_ASM287486v1

Download annotations/find similar RTs

Seq: MCST01000016.1 Vibrio lentus strain 10N.286.54.F7 10N.286.54.F7_contig_22, whole genome shotgun sequence (56924 bp)
Overview 1 RT 1: 24119-29579 bp Neighborhood of RT #1 [24119, 29590] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 24119-24412 bp Feature: domain Description: trans_reg_C Location: 24182-24401 bp Feature: domain Description: trans_reg_C Location: 241 82-24401 bp Feature: gene Location: 24444-24818 bp Feature: domain Description: Avd_like Location: 24474-24804 bp Feature: domain Description: Avd_like Location: 24474-24804 bp Feature: gene Location: 24798-26054 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25005-25707 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25005-25707 bp Feature: gene Location: 26416-26907 bp Feature: gene Location: 26996-29590 bp Feature: domain Description: Big_1 Location: 28577-28706 bp Feature: domain Description: Big_1 Location: 28577-28706 bp Feature: domain Description: Big_1 Location: 28814-28997 bp Feature: domain Description: Big_1 Location: 2881 4-28997 bp Feature: domain Description: DUF1566 Location: 29324-29579 bp Feature: domain Description: DUF1 566 Location: 29324-29579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), Avd_like (cd16376), RVT-DGRs, Big_1 (pfam02369), DUF1566 (pfam07603)

Seq: MCST01000023.1 Vibrio lentus strain 10N.286.54.F7 10N.286.54.F7_contig_29, whole genome shotgun sequence (56291 bp)
Overview 1 RT 1: 36313-46957 bp Neighborhood of RT #1 [36313, 46962] AE_Prim_S_like RVT-UG10 pheT pheS Feature: gene Location: 36313-37239 bp Feature: gene Location: 37520-37882 bp Feature: gene Location: 38003-43330 bp Feature: domain Description: AE_Prim_S_like Location: 38078-38393 bp Feature: domain Description: AE_Prim_S_like Location: 38078-38393 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 39335-39995 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 39335-39995 bp Feature: gene Location: 43480-45867 bp Feature: domain Description: pheT Location: 43483-45865 bp Feature: domain Description: pheT Location: 43483-45865 bp Feature: gene Location: 45886-46962 bp Feature: domain Description: pheS Location: 45979-46957 bp Feature: domain Description: pheS Location: 45979-46957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, pheT (PRK09616), pheS (TIGR00468)