myRT

myRT report for GCA_002875145.1_ASM287514v1

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Seq: MDBP01000078.1 Vibrio tasmaniensis strain 10N.222.48.A2 10N.222.48.A2_contig_58, whole genome shotgun sequence (35689 bp)
Overview 1 RT 1: 20891-30876 bp Neighborhood of RT #1 [20891, 31043] RVT-GII DUF4144 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Feature: gene Location: 20891-21124 bp Feature: gene Location: 21128-22960 bp Feature: gene Location: 22988-23242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22997-23225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22997-23225 bp Feature: gene Location: 23438-23761 bp Feature: domain Description: DUF4144 Location: 23450-23744 bp Feature: domain Description: DUF41 44 Location: 23450-23744 bp Feature: gene Location: 24024-31043 bp Feature: domain Description: Laminin_G_3 Location: 24876-25278 bp Feature: domain Description: Laminin_G_3 Location: 24876-25278 bp Feature: domain Description: Laminin_G_3 Location: 25785-26223 bp Feature: domain Description: Laminin_G_3 Location: 25785-26223 bp Feature: domain Description: Laminin_G_3 Location: 26766-27162 bp Feature: domain Description: Laminin_G_3 Location: 26766-271 62 bp Feature: domain Description: Laminin_G_3 Location: 27717-28119 bp Feature: domain Description: Laminin_G_3 Location: 2771 7-281 1 9 bp Feature: domain Description: Laminin_G_3 Location: 28623-29040 bp Feature: domain Description: Laminin_G_3 Location: 28623-29040 bp Feature: domain Description: Laminin_G_3 Location: 29559-29967 bp Feature: domain Description: Laminin_G_3 Location: 29559-29967 bp Feature: domain Description: Laminin_G_3 Location: 30510-30876 bp Feature: domain Description: Laminin_G_3 Location: 3051 0-30876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4144 (pfam13642), Laminin_G_3 (pfam13385)

Seq: MDBP01000099.1 Vibrio tasmaniensis strain 10N.222.48.A2 10N.222.48.A2_contig_77, whole genome shotgun sequence (11790 bp)
Overview 1 RT 1: 3446-10800 bp Neighborhood of RT #1 [3446, 10800] PRK10795 RVT_N RVT-GII GIIM HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 3446-5308 bp Feature: domain Description: PRK10795 Location: 3449-5297 bp Feature: domain Description: PRK10795 Location: 3449-52 97 bp Feature: gene Location: 5846-6103 bp Feature: gene Location: 6167-7780 bp Feature: RT Description: RVT_N Location: 6374-6617 bp Feature: RT Description: RVT_N Location: 6374-6617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6662-7289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6662 -72 89 bp Feature: domain Description: GIIM Note: maturase Location: 7346-7574 bp Feature: domain Description: GIIM Note: maturase Location: 7346-7574 bp Feature: gene Location: 8630-9868 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8894-9038 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8894-9038 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 9098-9809 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 9098-9809 bp Feature: gene Location: 10015-10800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10795 (penicillin-binding protein 2; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)