myRT

myRT report for GCA_002875245.1_ASM287524v1

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Seq: MDBI01000010.1 Vibrio breoganii strain 10N.222.51.A12 10N.222.51.A12_contig_106, whole genome shotgun sequence (2289 bp)
Overview 1 RT 1: 1041-2286 bp Neighborhood of RT #1 [1041, 2288] RVT-GII RVT-GII Feature: gene Location: 1041-1316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1044-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 044-1 275 bp Feature: gene Location: 1857-2288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001-2286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001 -2286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDBI01000073.1 Vibrio breoganii strain 10N.222.51.A12 10N.222.51.A12_contig_21, whole genome shotgun sequence (55733 bp)
Overview 1 RT 1: 37519-44162 bp Neighborhood of RT #1 [37519, 44392] Cls Toluene_X Toluene_X RVT-GII GIIM PRK10216 EmrA Feature: gene Location: 37519-39036 bp Feature: domain Description: Cls Location: 37699-39022 bp Feature: domain Description: Cls Location: 37699-3902 2 bp Feature: gene Location: 39091-40329 bp Feature: domain Description: Toluene_X Location: 39211-39682 bp Feature: domain Description: Toluene_X Location: 392 11-39682 bp Feature: domain Description: Toluene_X Location: 39685-40324 bp Feature: domain Description: Toluene_X Location: 39685-4032 4 bp Feature: gene Location: 40562-41806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40724-41417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4072 4-41417 bp Feature: domain Description: GIIM Note: maturase Location: 41501-41720 bp Feature: domain Description: GIIM Note: maturase Location: 41501-4172 0 bp Feature: gene Location: 42469-43287 bp Feature: domain Description: PRK10216 Location: 42481-42925 bp Feature: domain Description: PRK102 16 Location: 42 481-42 92 5 bp Feature: gene Location: 43361-44392 bp Feature: domain Description: EmrA Location: 43451-44162 bp Feature: domain Description: EmrA Location: 43451-44162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cls (COG1502), Toluene_X (pfam03349), RVT-GII, GIIM (pfam08388), PRK10216 (HTH-type transcriptional regulator YidZ), EmrA (COG1566)

Seq: MDBI01000076.1 Vibrio breoganii strain 10N.222.51.A12 10N.222.51.A12_contig_24, whole genome shotgun sequence (51350 bp)
Overview 1 RT 1: 44647-51149 bp Neighborhood of RT #1 [44647, 51349] AAA_21 RVT-Retrons DUF3800 Feature: gene Location: 44647-44877 bp Feature: gene Location: 44990-47098 bp Feature: domain Description: AAA_21 Location: 45065-46013 bp Feature: domain Description: AAA_21 Location: 45065-46013 bp Feature: gene Location: 47285-48334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47420-47960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47420-47960 bp Feature: gene Location: 48390-50099 bp Feature: gene Location: 50156-51349 bp Feature: domain Description: DUF3800 Location: 50279-51149 bp Feature: domain Description: DUF3 800 Location: 50279-51149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, DUF3800 (pfam12686)

Seq: MDBI01000082.1 Vibrio breoganii strain 10N.222.51.A12 10N.222.51.A12_contig_3, whole genome shotgun sequence (3574 bp)
Overview 1 RT 1: 282-2690 bp Neighborhood of RT #1 [282, 2746] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 282-413 bp Feature: gene Location: 623-1936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 2-14 57 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1709 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1709 bp Feature: gene Location: 1963-2106 bp Feature: gene Location: 2426-2746 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2450-2690 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 24 50-2690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: MDBI01000141.1 Vibrio breoganii strain 10N.222.51.A12 10N.222.51.A12_contig_83, whole genome shotgun sequence (36902 bp)
Overview 1 RT 1: 31087-36065 bp Neighborhood of RT #1 [31087, 36553] MFS_MdfA_MDR_like MarR RVT-UG8 RVT-UG3 Feature: gene Location: 31087-32283 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 31117-32230 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 31117-32230 bp Feature: gene Location: 32381-32872 bp Feature: domain Description: MarR Location: 32483-32858 bp Feature: domain Description: MarR Location: 32483-3285 8 bp Feature: gene Location: 33341-35290 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 33815-34262 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 33815 -34262 bp Feature: gene Location: 35291-36553 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 35582-36065 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 35 5 82-36065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MdfA_MDR_like (cd17320), MarR (pfam01047), RVT-UG8, RVT-UG3