myRT

myRT report for GCA_002875355.1_ASM287535v1

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Seq: MDBC01000042.1 Vibrio breoganii strain 10N.222.51.E3 10N.222.51.E3_contig_27, whole genome shotgun sequence (39669 bp)
Overview 1 RT 1: 32061-38948 bp Neighborhood of RT #1 [32061, 39667] YfaS Csx1_III-U RVT-UNC Feature: gene Location: 32061-36698 bp Feature: domain Description: YfaS Location: 32385-36657 bp Feature: domain Description: YfaS Location: 32385-36657 bp Feature: gene Location: 36885-38018 bp Feature: domain Description: Csx1_III-U Location: 36888-37551 bp Feature: domain Description: Csx1 _III-U Location: 36888-37551 bp Feature: gene Location: 38015-39667 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 38303-38948 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 38303-38948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfaS (COG2373), Csx1_III-U (cl21570), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC)

Seq: MDBC01000076.1 Vibrio breoganii strain 10N.222.51.E3 10N.222.51.E3_contig_58, whole genome shotgun sequence (4593 bp)
Overview 1 RT 1: 758-3687 bp Neighborhood of RT #1 [758, 3764] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 758-1018 bp Feature: gene Location: 1301-1432 bp Feature: gene Location: 1642-2955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1861-2476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1861-2 476 bp Feature: domain Description: GIIM Note: maturase Location: 2527-2728 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 7-2 72 8 bp Feature: gene Location: 2982-3125 bp Feature: gene Location: 3423-3764 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3447-3687 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3447-3687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: MDBC01000099.1 Vibrio breoganii strain 10N.222.51.E3 10N.222.51.E3_contig_79, whole genome shotgun sequence (2091 bp)
Overview 1 RT 1: 2-1842 bp Neighborhood of RT #1 [2, 2072] RVT-GII GIIM Feature: gene Location: 2-148 bp Feature: gene Location: 348-575 bp Feature: gene Location: 738-2072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1572 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1842 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)