myRT

myRT report for GCA_002875425.1_ASM287542v1

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Seq: MDAT01000043.1 Vibrio breoganii strain 10N.222.52.C10 10N.222.52.C10_contig_16, whole genome shotgun sequence (1690 bp)
Overview 1 RT 1: 3-1689 bp Neighborhood of RT #1 [3, 1689] RVT-GII Feature: gene Location: 3-953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 6-837 bp Feature: gene Location: 1116-1343 bp Feature: gene Location: 1543-1689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAT01000044.1 Vibrio breoganii strain 10N.222.52.C10 10N.222.52.C10_contig_17, whole genome shotgun sequence (585 bp)
Overview 1 RT 1: 129-582 bp Neighborhood of RT #1 [129, 584] RVT-GII Feature: gene Location: 129-584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 -582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAT01000049.1 Vibrio breoganii strain 10N.222.52.C10 10N.222.52.C10_contig_21, whole genome shotgun sequence (118790 bp)
Overview 1 RT 1: 77072-86689 bp Neighborhood of RT #1 [77072, 86730] DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 RVT-UNC Csx1_III-U YfaS Feature: gene Location: 77072-78820 bp Feature: domain Description: DEXXQc_Upf1-like Location: 77699-77855 bp Feature: domain Description: DEXXQc_Upf1-like Location: 77699-77855 bp Feature: domain Description: DEXXQc_Upf1-like Location: 78032-78284 bp Feature: domain Description: DEXXQc_Upf1-like Location: 7803 2-78284 bp Feature: domain Description: KOG1803 Location: 78482-78734 bp Feature: domain Description: KOG1803 Location: 78482-7873 4 bp Feature: gene Location: 78898-79107 bp Feature: gene Location: 79157-80776 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79412-80057 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79412-80057 bp Feature: gene Location: 80773-81906 bp Feature: domain Description: Csx1_III-U Location: 80776-81439 bp Feature: domain Description: Csx1_III-U Location: 80776-8143 9 bp Feature: gene Location: 82093-86730 bp Feature: domain Description: YfaS Location: 82417-86689 bp Feature: domain Description: YfaS Location: 82417-86689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC), Csx1_III-U (cl21570), YfaS (COG2373)

Seq: MDAT01000123.1 Vibrio breoganii strain 10N.222.52.C10 10N.222.52.C10_contig_89, whole genome shotgun sequence (4593 bp)
Overview 1 RT 1: 830-3836 bp Neighborhood of RT #1 [830, 3836] DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 830-1171 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 854-1094 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 854 -1094 bp Feature: gene Location: 1469-1612 bp Feature: gene Location: 1639-2952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858-2473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858-24 73 bp Feature: domain Description: GIIM Note: maturase Location: 2524-2725 bp Feature: domain Description: GIIM Note: maturase Location: 2524 -2725 bp Feature: gene Location: 3162-3293 bp Feature: gene Location: 3576-3836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)