myRT

myRT report for GCA_002875525.1_ASM287552v1

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Seq: MDAN01000035.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_129, whole genome shotgun sequence (1661 bp)
Overview 1 RT 1: 2-1581 bp Neighborhood of RT #1 [2, 1658] RVT_N RVT-GII Feature: gene Location: 2-148 bp Feature: gene Location: 240-383 bp Feature: gene Location: 618-1658 bp Feature: domain Description: RVT_N Location: 666-909 bp Feature: domain Description: RVT_N Location: 666-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1 581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: MDAN01000037.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_130, whole genome shotgun sequence (5829 bp)
Overview 1 RT 1: 2580-5743 bp Neighborhood of RT #1 [2580, 5826] SSL2 RVT_N RVT-GII Feature: gene Location: 2580-3959 bp Feature: domain Description: SSL2 Location: 2586-3813 bp Feature: domain Description: SSL2 Location: 2 586-3813 bp Feature: gene Location: 4480-4623 bp Feature: gene Location: 4858-5826 bp Feature: domain Description: RVT_N Location: 4906-5149 bp Feature: domain Description: RVT_N Location: 4906-5149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5194-5743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5194-5743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT_N (pfam13655), RVT-GII

Seq: MDAN01000047.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_14, whole genome shotgun sequence (1860 bp)
Overview 1 RT 1: 241-1671 bp Neighborhood of RT #1 [241, 1859] RVT-GII GIIM Feature: gene Location: 241-372 bp Feature: gene Location: 582-1859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1413 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1671 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MDAN01000103.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_190, whole genome shotgun sequence (405 bp)
Overview 1 RT 1: 1-394 bp Neighborhood of RT #1 [1, 402] RVT-GII GIIM Feature: gene Location: 1-402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -151 bp Feature: domain Description: GIIM Note: maturase Location: 196-394 bp Feature: domain Description: GIIM Note: maturase Location: 196-394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MDAN01000104.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_191, whole genome shotgun sequence (297 bp)
Overview 1 RT 1: 2-296 bp Neighborhood of RT #1 [2, 295] RVT-GII Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAN01000161.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_32, whole genome shotgun sequence (961 bp)
Overview 1 RT 1: 1-676 bp Neighborhood of RT #1 [1, 678] RVT-GII Feature: gene Location: 1-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-6 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAN01000162.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_33, whole genome shotgun sequence (43469 bp)
Overview 1 RT 1: 520-6170 bp Neighborhood of RT #1 [520, 6170] RVT-UG4 Feature: gene Location: 520-1020 bp Feature: gene Location: 1295-2272 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1655-2108 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1655-2108 bp Feature: gene Location: 2408-5263 bp Feature: gene Location: 5712-6170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: MDAN01000171.1 Vibrio sp. 10N.222.55.C12 10N.222.55.C12_contig_41, whole genome shotgun sequence (85678 bp)
Overview 1 RT 1: 17772-26380 bp Neighborhood of RT #1 [17772, 26403] RVT-GII ThrE ThrE ThrE Feature: gene Location: 17772-21929 bp Feature: gene Location: 21931-24102 bp Feature: gene Location: 24080-24280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24122-24272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24122-24272 bp Feature: gene Location: 24612-24857 bp Feature: gene Location: 25159-26403 bp Feature: domain Description: ThrE Location: 25270-25474 bp Feature: domain Description: ThrE Location: 25270-25474 bp Feature: domain Description: ThrE Location: 25531-25930 bp Feature: domain Description: ThrE Location: 25531-25930 bp Feature: domain Description: ThrE Location: 25978-26380 bp Feature: domain Description: ThrE Location: 25978 -2638 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ThrE (pfam06738)