myRT

myRT report for GCA_002875625.1_ASM287562v1

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Seq: MDAE01000008.1 Vibrio lentus strain 10N.261.45.C3 10N.261.45.C3_contig_15, whole genome shotgun sequence (159457 bp)
Overview 1 RT 1: 123778-129235 bp Neighborhood of RT #1 [123778, 129246] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 123778-126369 bp Feature: domain Description: Big_1 Location: 125359-125488 bp Feature: domain Description: Big_1 Location: 1 25359-1 25488 bp Feature: domain Description: Big_1 Location: 125596-125779 bp Feature: domain Description: Big_1 Location: 1 25596-1 25779 bp Feature: domain Description: DUF1566 Location: 126106-126358 bp Feature: domain Description: DUF1 566 Location: 1 261 06-1 26358 bp Feature: gene Location: 126458-126949 bp Feature: gene Location: 127311-128567 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 127518-128220 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2751 8-1 28220 bp Feature: gene Location: 128547-128921 bp Feature: domain Description: Avd_like Location: 128577-128907 bp Feature: domain Description: Avd_like Location: 1 28577-1 28907 bp Feature: gene Location: 128953-129246 bp Feature: domain Description: trans_reg_C Location: 129016-129235 bp Feature: domain Description: trans_reg_C Location: 1 2901 6-1 29235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)

Seq: MDAE01000034.1 Vibrio lentus strain 10N.261.45.C3 10N.261.45.C3_contig_4, whole genome shotgun sequence (917915 bp)
Overview 1 RT 1: 889926-895968 bp Neighborhood of RT #1 [889926, 895985] MFS_MefA_like RVT_N RVT-GII GIIM Cas6_I-F Csy3_I-F Feature: gene Location: 889926-891107 bp Feature: domain Description: MFS_MefA_like Location: 889941-891063 bp Feature: domain Description: MFS_MefA_like Location: 889941-891063 bp Feature: gene Location: 891635-891766 bp Feature: gene Location: 892379-893851 bp Feature: domain Description: RVT_N Location: 892427-892670 bp Feature: domain Description: RVT_N Location: 892 42 7-892 670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892715-893342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892 715-893342 bp Feature: domain Description: GIIM Note: maturase Location: 893402-893627 bp Feature: domain Description: GIIM Note: maturase Location: 893402 -89362 7 bp Feature: gene Location: 894339-894944 bp Feature: domain Description: Cas6_I-F Location: 894351-894936 bp Feature: domain Description: Cas6_I-F Location: 894351-894936 bp Feature: gene Location: 894954-895985 bp Feature: domain Description: Csy3_I-F Location: 894963-895968 bp Feature: domain Description: Csy3_I-F Location: 894963-895968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Cas6_I-F (cl09835), Csy3_I-F (cl09832)

Seq: MDAE01000040.1 Vibrio lentus strain 10N.261.45.C3 10N.261.45.C3_contig_45, whole genome shotgun sequence (11130 bp)
Overview 1 RT 1: 4954-10627 bp Neighborhood of RT #1 [4954, 10627] RVT-UG5 nitrilase Feature: gene Location: 4954-5475 bp Feature: gene Location: 5607-6296 bp Feature: gene Location: 6911-9859 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7415-7904 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7415-7904 bp Feature: domain Description: nitrilase Location: 9197-9785 bp Feature: domain Description: nitrilase Location: 9197-9785 bp Feature: gene Location: 9892-10368 bp Feature: gene Location: 10445-10627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424)