myRT

myRT report for GCA_002875915.1_ASM287591v1

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Seq: MCZO01000012.1 Vibrio breoganii strain 10N.261.46.C3 10N.261.46.C3_contig_108, whole genome shotgun sequence (297 bp)
Overview 1 RT 1: 2-293 bp Neighborhood of RT #1 [2, 295] RVT-GII Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCZO01000020.1 Vibrio breoganii strain 10N.261.46.C3 10N.261.46.C3_contig_115, whole genome shotgun sequence (547 bp)
Overview 1 RT 1: 1-355 bp Neighborhood of RT #1 [1, 546] RVT-DGRs GIIM Feature: gene Location: 1-546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-88 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-88 bp Feature: domain Description: GIIM Note: maturase Location: 133-355 bp Feature: domain Description: GIIM Note: maturase Location: 133-355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, GIIM (pfam08388)

Seq: MCZO01000021.1 Vibrio breoganii strain 10N.261.46.C3 10N.261.46.C3_contig_116, whole genome shotgun sequence (4747 bp)
Overview 1 RT 1: 913-3842 bp Neighborhood of RT #1 [913, 3919] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 913-1173 bp Feature: gene Location: 1456-1587 bp Feature: gene Location: 1797-3110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2016-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2016-263 1 bp Feature: domain Description: GIIM Note: maturase Location: 2682-2883 bp Feature: domain Description: GIIM Note: maturase Location: 2682-2883 bp Feature: gene Location: 3137-3280 bp Feature: gene Location: 3578-3919 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3602-3842 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3 602-3 842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: MCZO01000110.1 Vibrio breoganii strain 10N.261.46.C3 10N.261.46.C3_contig_63, whole genome shotgun sequence (1599 bp)
Overview 1 RT 1: 3-1548 bp Neighborhood of RT #1 [3, 1548] RVT-GII Feature: gene Location: 3-770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-768 bp Feature: gene Location: 933-1160 bp Feature: gene Location: 1360-1548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCZO01000137.1 Vibrio breoganii strain 10N.261.46.C3 10N.261.46.C3_contig_88, whole genome shotgun sequence (44513 bp)
Overview 1 RT 1: 23928-33539 bp Neighborhood of RT #1 [23928, 33586] DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 RVT-UNC Csx1_III-U YfaS Feature: gene Location: 23928-25676 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24555-24711 bp Feature: domain Description: DEXXQc_Upf1-like Location: 245 5 5 -24711 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24888-25140 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24888-25 140 bp Feature: domain Description: KOG1803 Location: 25338-25590 bp Feature: domain Description: KOG1803 Location: 25 338-25 5 90 bp Feature: gene Location: 25754-25963 bp Feature: gene Location: 26013-27632 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 26268-26913 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 26268-26913 bp Feature: gene Location: 27629-28762 bp Feature: domain Description: Csx1_III-U Location: 27632-28295 bp Feature: domain Description: Csx1_III-U Location: 27632-28295 bp Feature: gene Location: 28949-33586 bp Feature: domain Description: YfaS Location: 29273-33539 bp Feature: domain Description: YfaS Location: 29273-335 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC), Csx1_III-U (cl21570), YfaS (COG2373)