myRT

myRT report for GCA_002875945.1_ASM287594v1

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Seq: MCZK01000108.1 Vibrio lentus strain 10N.261.46.F8 10N.261.46.F8_contig_29, whole genome shotgun sequence (10486 bp)
Overview 1 RT 1: 6035-10028 bp Neighborhood of RT #1 [6035, 10210] DEXDc_RapA DEXDc_RapA PRK04914 HTH_17 RVT-Retrons Feature: gene Location: 6035-9277 bp Feature: domain Description: DEXDc_RapA Location: 6086-6230 bp Feature: domain Description: DEXDc_RapA Location: 6086-6230 bp Feature: domain Description: DEXDc_RapA Location: 6860-7025 bp Feature: domain Description: DEXDc_RapA Location: 6860-7025 bp Feature: domain Description: PRK04914 Location: 8777-8900 bp Feature: domain Description: PRK0491 4 Location: 8777-8900 bp Feature: gene Location: 9430-9603 bp Feature: domain Description: HTH_17 Location: 9448-9595 bp Feature: domain Description: HTH_1 7 Location: 9448-9595 bp Feature: gene Location: 9641-10210 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9680-10028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9680-1 0028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc_RapA (cd18011), PRK04914 (RNA polymerase-associated protein RapA), HTH_17 (pfam12728), RVT-Retrons

Seq: MCZK01000173.1 Vibrio lentus strain 10N.261.46.F8 10N.261.46.F8_contig_88, whole genome shotgun sequence (66998 bp)
Overview 1 RT 1: 2-4852 bp Neighborhood of RT #1 [2, 4935] RVT-UG1 nitrilase_Rim1_like GstA Feature: gene Location: 2-3505 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 401-893 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 401-893 bp Feature: domain Description: nitrilase_Rim1_like Location: 2876-3200 bp Feature: domain Description: nitrilase_Rim1_like Location: 2 876-32 00 bp Feature: gene Location: 3514-3942 bp Feature: gene Location: 4261-4935 bp Feature: domain Description: GstA Location: 4264-4852 bp Feature: domain Description: GstA Location: 42 64-4852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, nitrilase_Rim1_like (cd07574), GstA (COG0625)