myRT

myRT report for GCA_002875965.1_ASM287596v1

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Seq: MCZJ01000021.1 Vibrio lentus strain 10N.261.48.A1 10N.261.48.A1_contig_27, whole genome shotgun sequence (6255 bp)
Overview 1 RT 1: 1348-6025 bp Neighborhood of RT #1 [1348, 6210] Arm-DNA-bind_3 INT_Rci_Hp1_C RVT-Retrons SEL1 COG3950 TIGR02646 Feature: gene Location: 1348-2541 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1375-1645 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 375-1 645 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1966-2467 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 966-2467 bp Feature: gene Location: 2706-2870 bp Feature: gene Location: 2871-3818 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2976-3573 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2976-3573 bp Feature: gene Location: 3819-5432 bp Feature: domain Description: SEL1 Location: 3888-3966 bp Feature: domain Description: SEL1 Location: 3888-3966 bp Feature: domain Description: COG3950 Location: 4002-5349 bp Feature: domain Description: COG3950 Location: 4002-5349 bp Feature: gene Location: 5419-6210 bp Feature: domain Description: TIGR02646 Location: 5488-6025 bp Feature: domain Description: TIGR02646 Location: 5488-6025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796), RVT-Retrons, SEL1 (smart00671), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: MCZJ01000043.1 Vibrio lentus strain 10N.261.48.A1 10N.261.48.A1_contig_5, whole genome shotgun sequence (55141 bp)
Overview 1 RT 1: 23153-28607 bp Neighborhood of RT #1 [23153, 28618] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 23153-23446 bp Feature: domain Description: trans_reg_C Location: 23216-23435 bp Feature: domain Description: trans_reg_C Location: 2 32 16-2 3435 bp Feature: gene Location: 23478-23852 bp Feature: domain Description: Avd_like Location: 23508-23838 bp Feature: domain Description: Avd_like Location: 2 3508-2 3838 bp Feature: gene Location: 23832-25088 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24039-24741 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4039-2 4741 bp Feature: gene Location: 25450-25941 bp Feature: gene Location: 26030-28618 bp Feature: domain Description: Big_1 Location: 27611-27740 bp Feature: domain Description: Big_1 Location: 2 7611-2 7740 bp Feature: domain Description: Big_1 Location: 27848-28031 bp Feature: domain Description: Big_1 Location: 2 7848-2 8031 bp Feature: domain Description: DUF1566 Location: 28358-28607 bp Feature: domain Description: DUF1566 Location: 2 8358-2 8607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), Avd_like (cd16376), RVT-DGRs, Big_1 (pfam02369), DUF1566 (pfam07603)