myRT

myRT report for GCA_002875995.1_ASM287599v1

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Seq: MCZF01000114.1 Vibrio splendidus strain 10N.261.48.B5 10N.261.48.B5_contig_20, whole genome shotgun sequence (59482 bp)
Overview 1 RT 1: 54886-57742 bp Neighborhood of RT #1 [54886, 57742] HTH_Tnp_ISL3 Avd_like RVT-DGRs Feature: gene Location: 54886-55083 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 54976-55063 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 54976-55063 bp Feature: gene Location: 55250-55666 bp Feature: domain Description: Avd_like Location: 55283-55607 bp Feature: domain Description: Avd_like Location: 55283-55607 bp Feature: gene Location: 55646-56950 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55856-56555 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55856-56555 bp Feature: gene Location: 57020-57238 bp Feature: gene Location: 57251-57742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_ISL3 (pfam13542), Avd_like (cd16376), RVT-DGRs

Seq: MCZF01000137.1 Vibrio splendidus strain 10N.261.48.B5 10N.261.48.B5_contig_220, whole genome shotgun sequence (2163 bp)
Overview 1 RT 1: 113-1520 bp Neighborhood of RT #1 [113, 1744] RVT_N RVT-GII GIIM Feature: gene Location: 113-1744 bp Feature: domain Description: RVT_N Location: 320-563 bp Feature: domain Description: RVT_N Location: 32 0-563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-12 35 bp Feature: domain Description: GIIM Note: maturase Location: 1295-1520 bp Feature: domain Description: GIIM Note: maturase Location: 12 95-152 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCZF01000176.1 Vibrio splendidus strain 10N.261.48.B5 10N.261.48.B5_contig_256, whole genome shotgun sequence (3302 bp)
Overview 1 RT 1: 1649-2897 bp Neighborhood of RT #1 [1649, 3121] RVT_N RVT-GII GIIM Feature: gene Location: 1649-3121 bp Feature: domain Description: RVT_N Location: 1697-1937 bp Feature: domain Description: RVT_N Location: 1697-193 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1985-2612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1985-2612 bp Feature: domain Description: GIIM Note: maturase Location: 2669-2897 bp Feature: domain Description: GIIM Note: maturase Location: 2669-2897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCZF01000266.1 Vibrio splendidus strain 10N.261.48.B5 10N.261.48.B5_contig_44, whole genome shotgun sequence (97496 bp)
Overview 1 RT 1: 3423-8108 bp Neighborhood of RT #1 [3423, 8452] RVT-UG7 PRK09737 N6_Mtase Feature: gene Location: 3423-4169 bp Feature: gene Location: 4258-4458 bp Feature: gene Location: 4478-5794 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4925-5315 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4 925-5315 bp Feature: gene Location: 5859-7262 bp Feature: domain Description: PRK09737 Location: 5868-7212 bp Feature: domain Description: PRK09737 Location: 5868-7212 bp Feature: gene Location: 7262-8452 bp Feature: domain Description: N6_Mtase Location: 7265-8108 bp Feature: domain Description: N6_Mtase Location: 7265-8108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09737 (type I restriction-modification system specificity subunit), N6_Mtase (pfam02384)