myRT

myRT report for GCA_002876105.1_ASM287610v1

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Seq: MCZB01000196.1 Vibrio lentus strain 10N.261.48.C5 10N.261.48.C5_contig_40, whole genome shotgun sequence (7937 bp)
Overview 1 RT 1: 1754-7754 bp Neighborhood of RT #1 [1754, 7852] VOC_like RVT_N RVT-GII GIIM DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 1754-2170 bp Feature: domain Description: VOC_like Location: 1772-2126 bp Feature: domain Description: VOC_like Location: 1 772-21 26 bp Feature: gene Location: 2724-2954 bp Feature: gene Location: 3089-4561 bp Feature: domain Description: RVT_N Location: 3137-3380 bp Feature: domain Description: RVT_N Location: 31 37-3380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3425-4052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3425-4052 bp Feature: domain Description: GIIM Note: maturase Location: 4112-4337 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 2-4337 bp Feature: gene Location: 4631-4792 bp Feature: gene Location: 4829-7852 bp Feature: domain Description: DUF4158 Location: 4862-5348 bp Feature: domain Description: DUF41 58 Location: 4862-5348 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6590-7754 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6590-7754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526)

Seq: MCZB01000197.1 Vibrio lentus strain 10N.261.48.C5 10N.261.48.C5_contig_41, whole genome shotgun sequence (12404 bp)
Overview 1 RT 1: 843-10075 bp Neighborhood of RT #1 [843, 10075] Cache_2 Tar RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM XerD XerD Feature: gene Location: 843-2480 bp Feature: domain Description: Cache_2 Location: 984-1233 bp Feature: domain Description: Cache_2 Location: 984-12 33 bp Feature: domain Description: Tar Location: 1338-2475 bp Feature: domain Description: Tar Location: 1338-2 475 bp Feature: gene Location: 3397-3594 bp Feature: gene Location: 3672-5144 bp Feature: domain Description: RVT_N Location: 3720-3963 bp Feature: domain Description: RVT_N Location: 372 0-3963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008-4635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008-4635 bp Feature: domain Description: GIIM Note: maturase Location: 4692-4920 bp Feature: domain Description: GIIM Note: maturase Location: 4692 -492 0 bp Feature: gene Location: 5230-5373 bp Feature: gene Location: 5608-7080 bp Feature: domain Description: RVT_N Location: 5656-5899 bp Feature: domain Description: RVT_N Location: 5656-5899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5944-6571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5944-6571 bp Feature: domain Description: GIIM Note: maturase Location: 6631-6856 bp Feature: domain Description: GIIM Note: maturase Location: 6631-6856 bp Feature: gene Location: 7297-8430 bp Feature: domain Description: XerD Location: 7447-7684 bp Feature: domain Description: XerD Location: 7447-7684 bp Feature: domain Description: XerD Location: 7735-8383 bp Feature: domain Description: XerD Location: 7735-8383 bp Feature: gene Location: 8438-10075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cache_2 (smart01049), Tar (COG0840), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), XerD (COG4974)

Seq: MCZB01000245.1 Vibrio lentus strain 10N.261.48.C5 10N.261.48.C5_contig_85, whole genome shotgun sequence (19677 bp)
Overview 1 RT 1: 13921-19499 bp Neighborhood of RT #1 [13921, 19522] HsdM INT_RitA_C_like RVT-UG2 DUF3644 EC042_2821 Feature: gene Location: 13921-15627 bp Feature: domain Description: HsdM Location: 13942-15610 bp Feature: domain Description: HsdM Location: 13 942-15610 bp Feature: gene Location: 15737-16333 bp Feature: domain Description: INT_RitA_C_like Location: 15785-16316 bp Feature: domain Description: INT_RitA_C_like Location: 15785-163 16 bp Feature: gene Location: 16414-17724 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 16615-17428 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 16615-17428 bp Feature: gene Location: 18218-19522 bp Feature: domain Description: DUF3644 Location: 18602-18800 bp Feature: domain Description: DUF3 644 Location: 18602-18800 bp Feature: domain Description: EC042_2821 Location: 18899-19499 bp Feature: domain Description: EC042_2821 Location: 18899-19499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), INT_RitA_C_like (cd01188), RVT-UG2, DUF3644 (pfam12358), EC042_2821 (pfam18740)