myRT

myRT report for GCA_002876165.1_ASM287616v1

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Seq: MCYM01000088.1 Vibrio breoganii strain 10N.261.51.B7 10N.261.51.B7_contig_25, whole genome shotgun sequence (136934 bp)
Overview 1 RT 1: 98713-104307 bp Neighborhood of RT #1 [98713, 104435] RVT_N RVT-GII GIIM AAA_21 RloB Feature: gene Location: 98713-100155 bp Feature: gene Location: 100551-100706 bp Feature: gene Location: 100924-102390 bp Feature: RT Description: RVT_N Location: 100978-101221 bp Feature: RT Description: RVT_N Location: 1 00978-1 01 221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101266-101893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 266-1 01 893 bp Feature: domain Description: GIIM Note: maturase Location: 101953-102178 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 953-1 021 78 bp Feature: gene Location: 102730-103914 bp Feature: domain Description: AAA_21 Location: 102871-103765 bp Feature: domain Description: AAA_21 Location: 1 02871 -1 03765 bp Feature: gene Location: 103926-104435 bp Feature: domain Description: RloB Location: 103971-104307 bp Feature: domain Description: RloB Location: 1 03971 -1 04307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304), RloB (pfam13707)

Seq: MCYM01000094.1 Vibrio breoganii strain 10N.261.51.B7 10N.261.51.B7_contig_30, whole genome shotgun sequence (14902 bp)
Overview 1 RT 1: 231-9123 bp Neighborhood of RT #1 [231, 9671] RVT_N RVT-GII GIIM INT_Rci_Hp1_C INT_Rci_Hp1_C Feature: gene Location: 231-4733 bp Feature: gene Location: 5587-7065 bp Feature: RT Description: RVT_N Location: 5641-5884 bp Feature: RT Description: RVT_N Location: 5641-5884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5929-6556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 9-6556 bp Feature: domain Description: GIIM Note: maturase Location: 6616-6841 bp Feature: domain Description: GIIM Note: maturase Location: 6616-6841 bp Feature: gene Location: 7228-7686 bp Feature: gene Location: 7683-9671 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8487-8658 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8487-8658 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8988-9123 bp Feature: domain Description: INT_Rci_Hp1_C Location: 8988-912 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), INT_Rci_Hp1_C (cd00796)

Seq: MCYM01000121.1 Vibrio breoganii strain 10N.261.51.B7 10N.261.51.B7_contig_55, whole genome shotgun sequence (2090 bp)
Overview 1 RT 1: 19-2089 bp Neighborhood of RT #1 [19, 2089] RVT-GII GIIM Feature: gene Location: 19-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232-853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 2-853 bp Feature: domain Description: GIIM Note: maturase Location: 901-1123 bp Feature: domain Description: GIIM Note: maturase Location: 901-1123 bp Feature: gene Location: 1516-1743 bp Feature: gene Location: 1943-2089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MCYM01000153.1 Vibrio breoganii strain 10N.261.51.B7 10N.261.51.B7_contig_84, whole genome shotgun sequence (3671 bp)
Overview 1 RT 1: 988-3452 bp Neighborhood of RT #1 [988, 3452] DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 988-1308 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1012-1252 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1012-1252 bp Feature: gene Location: 1628-1771 bp Feature: gene Location: 1798-3111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017-2632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017-2632 bp Feature: domain Description: GIIM Note: maturase Location: 2683-2884 bp Feature: domain Description: GIIM Note: maturase Location: 2683-2884 bp Feature: gene Location: 3321-3452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)