myRT

myRT report for GCA_002876325.1_ASM287632v1

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Seq: MCYD01000825.1 Vibrio sp. 10N.261.52.A1 10N.261.52.A1_contig_44, whole genome shotgun sequence (49994 bp)
Overview 1 RT 1: 24424-28490 bp Neighborhood of RT #1 [24424, 28490] RVT_N RVT-GII GIIM Feature: gene Location: 24424-24639 bp Feature: gene Location: 24796-24930 bp Feature: gene Location: 24975-26606 bp Feature: domain Description: RVT_N Location: 25182-25425 bp Feature: domain Description: RVT_N Location: 251 82-25425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25470-26097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25470-26097 bp Feature: domain Description: GIIM Note: maturase Location: 26157-26382 bp Feature: domain Description: GIIM Note: maturase Location: 261 57-26382 bp Feature: gene Location: 26987-27466 bp Feature: gene Location: 27759-28490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCYD01001040.1 Vibrio sp. 10N.261.52.A1 10N.261.52.A1_contig_633, whole genome shotgun sequence (12004 bp)
Overview 1 RT 1: 4011-11001 bp Neighborhood of RT #1 [4011, 11282] TniQ RVT-UG1 SSL2 Feature: gene Location: 4011-5222 bp Feature: domain Description: TniQ Location: 4026-4479 bp Feature: domain Description: TniQ Location: 402 6-4479 bp Feature: gene Location: 5350-5802 bp Feature: gene Location: 5799-9710 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6489-7032 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6489-7032 bp Feature: gene Location: 9722-9925 bp Feature: gene Location: 10011-11282 bp Feature: domain Description: SSL2 Location: 10230-11001 bp Feature: domain Description: SSL2 Location: 102 30-11001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TniQ (pfam06527), RVT-UG1, SSL2 (COG1061)