myRT

myRT report for GCA_002876575.1_ASM287657v1

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Seq: MDAU01000023.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_118, whole genome shotgun sequence (228 bp)
Overview 1 RT 1: 2-224 bp Neighborhood of RT #1 [2, 226] RVT-GII Feature: gene Location: 2-226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAU01000024.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_119, whole genome shotgun sequence (228 bp)
Overview 1 RT 1: 2-224 bp Neighborhood of RT #1 [2, 226] RVT-GII Feature: gene Location: 2-226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-2 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAU01000060.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_24, whole genome shotgun sequence (118790 bp)
Overview 1 RT 1: 32061-41633 bp Neighborhood of RT #1 [32061, 41719] YfaS Csx1_III-U RVT-UNC DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 Feature: gene Location: 32061-36698 bp Feature: domain Description: YfaS Location: 32385-36657 bp Feature: domain Description: YfaS Location: 3 23 85-3 6657 bp Feature: gene Location: 36885-38018 bp Feature: domain Description: Csx1_III-U Location: 36888-37551 bp Feature: domain Description: Csx1_III-U Location: 3 6888-3 7551 bp Feature: gene Location: 38015-39634 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 38270-38915 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3 8270-3 8915 bp Feature: gene Location: 39684-39893 bp Feature: gene Location: 39971-41719 bp Feature: domain Description: DEXXQc_Upf1-like Location: 40598-40754 bp Feature: domain Description: DEXXQc_Upf1-like Location: 40598-40754 bp Feature: domain Description: DEXXQc_Upf1-like Location: 40931-41183 bp Feature: domain Description: DEXXQc_Upf1-like Location: 4093 1-41183 bp Feature: domain Description: KOG1803 Location: 41381-41633 bp Feature: domain Description: KOG1803 Location: 413 81-4163 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfaS (COG2373), Csx1_III-U (cl21570), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC), DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase )

Seq: MDAU01000114.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_73, whole genome shotgun sequence (4593 bp)
Overview 1 RT 1: 830-3836 bp Neighborhood of RT #1 [830, 3836] DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 830-1171 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 854-1094 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 854 -1094 bp Feature: gene Location: 1469-1612 bp Feature: gene Location: 1639-2952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858-2473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858-24 73 bp Feature: domain Description: GIIM Note: maturase Location: 2524-2725 bp Feature: domain Description: GIIM Note: maturase Location: 2524 -2725 bp Feature: gene Location: 3162-3293 bp Feature: gene Location: 3576-3836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)

Seq: MDAU01000122.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_80, whole genome shotgun sequence (1336 bp)
Overview 1 RT 1: 2-1335 bp Neighborhood of RT #1 [2, 1334] RVT-GII Feature: gene Location: 2-148 bp Feature: gene Location: 348-575 bp Feature: gene Location: 738-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 1-1335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAU01000129.1 Vibrio breoganii strain 10N.222.52.B8 10N.222.52.B8_contig_87, whole genome shotgun sequence (585 bp)
Overview 1 RT 1: 2-509 bp Neighborhood of RT #1 [2, 583] RVT-GII Feature: gene Location: 2-583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII