myRT

myRT report for GCA_002876645.1_ASM287664v1

Download annotations/find similar RTs

Seq: MDAS01000037.1 Vibrio splendidus strain 10N.222.52.F3 10N.222.52.F3_contig_39, whole genome shotgun sequence (58695 bp)
Overview 1 RT 1: 43351-50175 bp Neighborhood of RT #1 [43351, 50207] SIR2_2 HATPase RVT-UG28 recD_rel Feature: gene Location: 43351-44523 bp Feature: domain Description: SIR2_2 Location: 43876-44374 bp Feature: domain Description: SIR2_2 Location: 43876-44374 bp Feature: gene Location: 44913-45938 bp Feature: domain Description: HATPase Location: 45378-45780 bp Feature: domain Description: HATPase Location: 45378-45780 bp Feature: gene Location: 46249-47751 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 46537-47176 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 46537-471 76 bp Feature: gene Location: 47888-48016 bp Feature: gene Location: 48030-50207 bp Feature: domain Description: recD_rel Location: 48279-50175 bp Feature: domain Description: recD_rel Location: 48279-501 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), HATPase (cl00075), RVT-UG28, recD_rel (TIGR01448)

Seq: MDAS01000069.1 Vibrio splendidus strain 10N.222.52.F3 10N.222.52.F3_contig_68, whole genome shotgun sequence (21657 bp)
Overview 1 RT 1: 12298-15098 bp Neighborhood of RT #1 [12298, 15109] RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 12298-12543 bp Feature: gene Location: 12577-12789 bp Feature: gene Location: 13147-14403 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13354-14056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13354-14056 bp Feature: gene Location: 14383-14757 bp Feature: domain Description: Avd_like Location: 14413-14743 bp Feature: domain Description: Avd_like Location: 14413-14743 bp Feature: gene Location: 14789-15109 bp Feature: domain Description: trans_reg_C Location: 14879-15098 bp Feature: domain Description: trans_reg_C Location: 14879-15098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)

Seq: MDAS01000083.1 Vibrio splendidus strain 10N.222.52.F3 10N.222.52.F3_contig_80, whole genome shotgun sequence (1206 bp)
Overview 1 RT 1: 16-979 bp Neighborhood of RT #1 [16, 1203] RVT-GII GIIM Feature: gene Location: 16-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67-694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67-694 bp Feature: domain Description: GIIM Note: maturase Location: 754-979 bp Feature: domain Description: GIIM Note: maturase Location: 754-979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)